Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1452 134 8e-30 seq17 111 9e-23 >seq1452 Length=10809 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| | |||||| || Sbjct 976 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTGAAAGCAACATCCGCC 917 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 916 GATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 860 >seq17 Length=11156084 Score = 111 bits (122), Expect = 9e-23 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 12 CTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTC 71 ||| |||||||| |||||||||| ||||| | |||||| ||||||||||||| Sbjct 4658552 CTTCGATTTCTCATAAGGTGCCGGCGGAGTCCTGAAAGCAACATCCGCCGATCCCTAGTC 4658493 Query 72 GGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 4658492 GGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 4658447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278391833310