Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1452 228 1e-57 seq5 100 5e-19 >seq1452 Length=10809 Score = 228 bits (252), Expect = 1e-57 Identities = 200/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| || |||| | |||||||||||||| Sbjct 616 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAACCCGACGCTCTGTATACATTAGCATGGG 675 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 676 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 734 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 735 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 794 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 795 AGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 853 Query 314 AGGGG 318 |||| Sbjct 854 GGGGG 858 >seq5 Length=15024279 Score = 100 bits (110), Expect = 5e-19 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 95 TGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGAATAATAGAATAGGACGTGCG 153 || |||||||| ||| ||| | |||||||||||| |||||| | ||| || | Sbjct 9770546 TGCTCAAAGCAAGCCCACACTCTATATACATTAGCATAGAATAACATCATAAGA-TTCTA 9770488 Query 154 GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 || ||||| |||||| | ||| | |||||||| | ||||| | ||||||| | Sbjct 9770487 GTCCTATTGTGTTGGCCTTCGGGATGGGAATAATGATTTACAGGGAGAATCGGGGGCATT 9770428 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCG-AAAG 272 ||||| || |||| ||||||| | |||||||||| ||||| ||| |||| |||| Sbjct 9770427 TGTATTTTATAGTCATAGGTGAAGTATTTGGATTTATGAAAGACGAACCGATGCGAAAAG 9770368 Query 273 CGTTCACCAAGGAT-GTTTTCATTAATCAGTGAACGAAAGTT-AGGG 317 | | ||||| || ||||| |||||| | ||| ||||||| |||| Sbjct 9770367 CATCTGCCAAGAATATTTTTCTTTAATC-GAGAATGAAAGTTGAGGG 9770322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915171363392