Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq2988 150 2e-34 seq918 150 2e-34 seq4 150 2e-34 seq3129 141 1e-31 seq3033 141 1e-31 seq559 141 1e-31 seq488 141 1e-31 seq201 141 1e-31 seq3 111 2e-22 >seq2988 Length=69904 Score = 150 bits (166), Expect = 2e-34 Identities = 182/244 (75%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 58958 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 58900 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 58899 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 58842 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 58841 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 58791 Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 | || |||| | ||| |||| |||||| |||||| || ||||||||||||||| Sbjct 58790 TCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 58731 Query 245 GGTA 248 |||| Sbjct 58730 GGTA 58727 Score = 141 bits (156), Expect = 1e-31 Identities = 182/248 (73%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| |||||||||||| ||| || ||||| || |||| | || || ||| | | Sbjct 69231 CCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGC 69173 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA---- 121 | |||||||| |||||||| || | || | |||| | | ||| |||||| Sbjct 69172 TATGTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGTGGCTGCCAATAGCTCAGGGAG 69113 Query 122 CACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || ||| ||||| ||| || ||||||||||||||||||| |||||||||| | Sbjct 69112 CAAGTCCCATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAG 69053 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | || ||||| | | | ||| || || | ||| |||||||||||||||||||| Sbjct 69052 TTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACCTGACCACCTGTGTCGGT 68993 Query 241 TTACGGTA 248 || |||| Sbjct 68992 TTCGGGTA 68985 >seq918 Length=372633 Score = 150 bits (166), Expect = 2e-34 Identities = 182/244 (75%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 60597 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 60655 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 60656 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 60713 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 60714 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 60764 Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 | || |||| | ||| |||| |||||| |||||| || ||||||||||||||| Sbjct 60765 TCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 60824 Query 245 GGTA 248 |||| Sbjct 60825 GGTA 60828 >seq4 Length=15584765 Score = 150 bits (166), Expect = 2e-34 Identities = 182/244 (75%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 15038204 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 15038262 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 15038263 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 15038320 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 15038321 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 15038371 Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 | || |||| | ||| |||| |||||| |||||| || ||||||||||||||| Sbjct 15038372 TCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 15038431 Query 245 GGTA 248 |||| Sbjct 15038432 GGTA 15038435 >seq3129 Length=159636 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 110350 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 110292 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 110291 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 110245 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 110244 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 110191 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 110190 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 110131 Query 246 GTA 248 ||| Sbjct 110130 GTA 110128 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 136753 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 136811 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 136812 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 136858 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 136859 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 136912 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 136913 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 136972 Query 246 GTA 248 ||| Sbjct 136973 GTA 136975 >seq3033 Length=62413 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 3263 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 3205 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 3204 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 3158 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 3157 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 3104 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 3103 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 3044 Query 246 GTA 248 ||| Sbjct 3043 GTA 3041 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 29666 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 29724 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 29725 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 29771 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 29772 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 29825 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 29826 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 29885 Query 246 GTA 248 ||| Sbjct 29886 GTA 29888 >seq559 Length=26669 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 262 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 320 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 321 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 367 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 368 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 421 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 422 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 481 Query 246 GTA 248 ||| Sbjct 482 GTA 484 >seq488 Length=28536 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 221 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 279 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 280 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 326 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 327 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 380 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 381 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 440 Query 246 GTA 248 ||| Sbjct 441 GTA 443 >seq201 Length=39725 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 35399 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 35341 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 35340 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 35294 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 35293 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 35240 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 35239 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 35180 Query 246 GTA 248 ||| Sbjct 35179 GTA 35177 >seq3 Length=16781886 Score = 111 bits (122), Expect = 2e-22 Identities = 90/108 (83%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||||||||||||||||| ||||||||||| |||||| || |||| | | Sbjct 8930094 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTC 8930035 Query 202 GA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || |||| |||||| |||||| || ||||||||||||||| |||| Sbjct 8930034 GACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTA 8929987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694378951217