Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1452 298 9e-79 seq11 210 3e-52 >seq1452 Length=10809 Score = 298 bits (330), Expect = 9e-79 Identities = 222/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1362 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1303 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | ||| | | |||||||||||||||||| ||| Sbjct 1302 CCTGTTATTGCCTCAAACTTCCGTGGCCTGAGCGGCCATAGTCCCTCTAAGAAGCTCGCC 1243 Query 122 ACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | | |||| |||||||| | ||||||||||||||| ||||||| Sbjct 1242 GCGGAGGGATGCCTCCGCGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 1183 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1182 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 1123 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||| Sbjct 1122 AAAGAGCTCTCAGTCTGTC 1104 >seq11 Length=13096665 Score = 210 bits (232), Expect = 3e-52 Identities = 187/229 (82%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCG-GCCCAGAACATCTAAGGGCATCACAG 60 ||||| || | | |||||||||| | |||||| |||||||||||||||||||||||||| Sbjct 7470336 ACTCGTTGAATACATCAGTGTAGCACACGTGCGTGCCCAGAACATCTAAGGGCATCACAG 7470277 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTG-GAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||||||||||||||||||||| | | ||| | ||||| |||||||| | | |||| | Sbjct 7470276 ACCTGTTATTGCCTCAAACTTTTGTGGCCTGAGCAGCCA-TAGTCCCTTTCAAAAGCTCG 7470218 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | | | | | |||| ||||||| | ||||||||||||||| ||||| Sbjct 7470217 CCGCGGAGGGATGCCTCCGCGTAGCTAGTTAGCAGACTGAGGTCTCGTTCGTTAACGGAA 7470158 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7470157 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCAC 7470109 Score = 114 bits (126), Expect = 2e-23 Identities = 92/109 (84%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC--TGTTATTGCC 73 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 7470948 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTATATTATTGCC 7470889 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 |||||||| | | | ||| | ||||| ||| |||||||| |||| Sbjct 7470888 TCAAACTTTCGTGGCCTGAGCGGTCATAGT-CCTGTAAGAAGCTCGCCA 7470841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796775847249