Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq559 131 1e-28 seq488 131 1e-28 seq201 131 1e-28 seq3129 122 7e-26 seq3033 122 7e-26 seq2519 122 7e-26 seq20 122 7e-26 seq2875 118 9e-25 seq1451 118 9e-25 seq9 109 5e-22 seq1 93.3 4e-17 seq10 80.6 2e-13 >seq559 Length=26669 Score = 131 bits (144), Expect = 1e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 4754 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 4813 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 4814 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4873 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 4874 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4913 >seq488 Length=28536 Score = 131 bits (144), Expect = 1e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 4713 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 4772 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 4773 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4832 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 4833 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4872 >seq201 Length=39725 Score = 131 bits (144), Expect = 1e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 30907 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 30848 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 30847 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 30788 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 30787 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 30748 >seq3129 Length=159636 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 105855 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 105796 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 105795 GATCGCGACCCTTTGTCCCGTCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 105736 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 105735 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 105696 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 141248 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 141307 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 141308 GATCGCGACCCTTTGTCCCGTCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 141367 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 141368 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 141407 >seq3033 Length=62413 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 34161 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 34220 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 34221 GATCGCGACCCTTTGTCCCGTCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 34280 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 34281 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 34320 >seq2519 Length=193586 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 107893 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 107834 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 107833 GATCGCGACCCTTTGTCCCGTCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 107774 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 107773 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 107734 >seq20 Length=10792357 Score = 122 bits (134), Expect = 7e-26 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 4292678 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 4292737 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 4292738 GATCGCGACCCTTTGTCCCGTCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4292797 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 4292798 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4292837 >seq2875 Length=101388 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 71857 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 71915 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 71916 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 71975 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 71976 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 72015 >seq1451 Length=294148 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 209256 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 209314 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 209315 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 209374 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 209375 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 209414 >seq9 Length=13841557 Score = 109 bits (120), Expect = 5e-22 Identities = 121/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||| | ||| | | ||||| | ||| ||||| ||| | | Sbjct 5625312 CGAGTTGCAGAGAACAATCTGAACTGAGGCAATCTTTCCAG-ATTCGCTCCGCCTTACAG 5625370 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| |||| ||||||||||||||| Sbjct 5625371 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAACCCATAAGGGCCAT 5625430 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | ||||||||||||||||| |||||||||| || | |||| Sbjct 5625431 GCGGACTTGACGTCATCCCGACCTTCCTCCAGTATCTCAC 5625470 >seq1 Length=24880688 Score = 93.3 bits (102), Expect = 4e-17 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGAT-TAGCTCCCCCTCGCG 60 |||||||| | || ||||||| ||| | | ||| || | ||| |||||| ||||||| Sbjct 22338652 CGAGTTGCTGTCTGCAATCCGAACTGC-AGACAGATTTTTGGAGCTAGCTCACCCTCGCA 22338594 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | | |||| ||| ||| |||| ||||||| |||||| |||||||| || Sbjct 22338593 AGATCATGACCCTTTGTCCCATCCACTGTAGCACGTGTGTCGCCCTAGGCATAAGGGGCA 22338534 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 ||| ||||||||||||||| ||| |||| | || || ||| Sbjct 22338533 TGATGACTTGACGTCATCCTCACATTCCGCTGGCTTATCA 22338494 >seq10 Length=13112115 Score = 80.6 bits (88), Expect = 2e-13 Identities = 116/161 (72%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| || ||||||| ||| | ||| ||| ||| ||||||| |||| | | Sbjct 11430629 CGAGTTGCAGCCTGCAATCCGAACTGAGGATGGGTTTT-TGGAGTTAGCTCACCCTTGTG 11430687 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | ||| |||| ||| |||||||| ||| | | || |||||| | | Sbjct 11430688 GGATCGCGACCCTTTGTCCCGTCCATTGTAGCGCGTATATCGTCCAGGGCATAAGAGGAA 11430747 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||| ||||||| ||||||||||| | || |||| Sbjct 11430748 TGATGACTTGATGTCATCCTCACCTTCCTCCAGCTTATCAC 11430788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415987390130