Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq2988 136 3e-30 seq201 87.8 1e-15 seq3129 82.4 5e-14 seq3033 82.4 5e-14 >seq2988 Length=69904 Score = 136 bits (150), Expect = 3e-30 Identities = 115/141 (82%), Gaps = 8/141 (6%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 69814 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 69755 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | |||| | ||||||| | |||| | |||||||| || ||| Sbjct 69754 CTTTCGTACCTGCTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACT-- 69697 Query 121 CACTACG----ATTTCCGACC 137 ||||| |||||||||| Sbjct 69696 --CTACGCGTGATTTCCGACC 69678 >seq201 Length=39725 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 35995 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 35936 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 35935 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 35878 >seq3129 Length=159636 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 110946 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 110887 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 110886 CTTTCGTCCCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 110829 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 136157 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 136216 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 136217 CTTTCGTCCCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 136274 >seq3033 Length=62413 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 3859 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 3800 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 3799 CTTTCGTCCCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 3742 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 29070 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 29129 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 29130 CTTTCGTCCCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 29187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351989674300