Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq10 75.2 2e-11 >seq10 Length=13112115 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 88 TGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGT 147 ||| || | || | || ||||||| |||| || || || ||| | |||||||||||| Sbjct 831040 TGAACAGCTCATGAAATGCTTCTT-GTGGTATATCGACAGAGCCAATGCGCTTCATGCGT 831098 Query 148 TTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAG 207 || || || |||| ||||| || | || || ||| || | || ||||| || ||| Sbjct 831099 TTCTTCCCTTCCTTCTGCTTTTCCAAAAGTTTCTTCTTCCGAGTGACATCACCACCATAG 831158 Query 208 CATTTGGCCAGTACGTTCTTTCT 230 ||||| || || || |||||||| Sbjct 831159 CATTTTGCTAGAACATTCTTTCT 831181 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 88 TGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGT 147 ||| || | || | || ||||||| |||| || || || ||| | ||||||||||| Sbjct 1099309 TGAACAGCTCATGAAATGCTTCTT-GTGGTATATCGACAGAGCCAATGTGCTTCATGCGT 1099251 Query 148 TTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAG 207 || || || |||| ||||| || | ||||| ||| || | || ||||| || ||| Sbjct 1099250 TTCTTCCCTTCCTTCTGCTTTTCCAAAAGCTTCTTCTTCCGAGTGACATCACCACCATAG 1099191 Query 208 CATTTGGCCAGTACGTTCTTTCT 230 ||||| || || || |||||||| Sbjct 1099190 CATTTTGCTAGAACATTCTTTCT 1099168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838373766464