Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1452 300 3e-79 seq11 259 9e-67 >seq1452 Length=10809 Score = 300 bits (332), Expect = 3e-79 Identities = 228/263 (87%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||||| ||| | |||||||||||||||||||||||||| Sbjct 1248 GCTTCTTAGAGGGACTATGGCCGCTCAGGCC-ACGGAAGTTTGAGGCAATAACAGGTCTG 1306 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| | |||||||| || Sbjct 1307 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTAT 1366 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG-CTGGGGATAG-AGC 246 ||||||||| ||| | ||||||||||| ||| | ||||| ||||||||| | | Sbjct 1367 AGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATTGGGGATAGAATC 1426 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA-GCGCGTGTCATCAGCACGCGT 305 ||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| ||||| Sbjct 1427 ATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAATGCGCGAGTCATCAGCTCGCGT 1486 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||||||||| Sbjct 1487 TGACTACGTCCCTGCCCTTTGTA 1509 >seq11 Length=13096665 Score = 259 bits (286), Expect = 9e-67 Identities = 216/261 (83%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||| | | ||||||||| | ||||| ||| | |||||||||||||||||||||||| Sbjct 7470221 GCTTTTGAAAGGGACTATGGCTGCTCAGGCC-ACAAAAGTTTGAGGCAATAACAGGTCTG 7470279 Query 129 TGATGCCCTTAGATGTTCTGGGC-CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||||||||| |||||| | |||||||||| | |||||||| | Sbjct 7470280 TGATGCCCTTAGATGTTCTGGGCACGCACGTGTGCTACACTGATGTATTCAACGAGTCTA 7470339 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||||||||| ||| ||| ||||||||| ||| | ||||| |||| ||||| || Sbjct 7470340 TAGCCTTGGCCGATAGGCCTGAGTAATCTTGAAAAATTTCATCGTGATGGGAATAGATCA 7470399 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| ||| ||||||||| ||||||||||||||||||| ||||||||| |||||| Sbjct 7470400 TTGCAATTGTTGGTCTTCAACGTGGAATGCCTAGTAAGCGCGAGTCATCAGCTTGCGTTG 7470459 Query 308 ATTACGTCCCTGCCCTTTGTA 328 | | | ||||||||||||||| Sbjct 7470460 ACTGCATCCCTGCCCTTTGTA 7470480 Score = 185 bits (204), Expect = 2e-44 Identities = 159/192 (83%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTAT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACA--GGTC 126 |||||||| ||| ||||| | ||||| ||| | | |||||||||||||||| | |||| Sbjct 7470847 GCTTCTTACAGG-ACTATGACCGCTCAGGCC-ACGAAAGTTTGAGGCAATAATATAGGTC 7470904 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct 7470905 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATATATTCAACGAGTCT 7470964 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 || ||||||||| || | ||||||||||| ||| | ||||| |||||||||| | Sbjct 7470965 ATAGCCTTGGCCGACGGGCCCGGGTAATCTTGAAAAATTTCATCGTGATGGGGATAGATC 7471024 Query 247 ATTGCAATTATT 258 |||||||||||| Sbjct 7471025 ATTGCAATTATT 7471036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947170362112