Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq433 104 2e-17 seq21 100 2e-16 >seq433 Length=30188 Score = 104 bits (114), Expect = 2e-17 Identities = 351/544 (65%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 ||||| ||||| | || || |||||||| | |||||||| || | ||| ||| | Sbjct 23701 TACAAGAAGGCCGTGGCGTCGTTCTGGACCGCCGAGGAGGTGGACCTCTCCGGCGACCTC 23760 Query 61159 AATGACTGGGAGCGTT---TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 ||||||||| | | || ||| || | | ||| | || ||| | || Sbjct 23761 CGGCACTGGGAGCTTGCGCTCTCCGGCGACGACCGGCGGTTCGTCTCCCACGTGCTCGCC 23820 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| ||||| || ||||| |||||| ||||| | || ||| | ||| Sbjct 23821 TTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCTCCCGCTTCATGGCCGAG 23880 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 || || || | ||||| || ||||||||||||||||| || || ||||| ||||| Sbjct 23881 GTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCGATCGAGAACATCCAC 23940 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA 61395 |||||||||||| | ||| |||| || |||||| | || | || || || Sbjct 23941 TCGGAGATGTACTCCCTCCTCCTCGAGACCTACATCCGCGACCCCCTCGAGAAGGACCGC 24000 Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 | ||| ||| |||| || | || || || || || | ||||| | Sbjct 24001 CTCTTCCGCGCCGTCGACACCGTCCCCTGCGTCGCCCGCAAGGCCGCGTGGGCGCTGCGC 24060 Query 61456 TGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 ||||| ||||| | || || | || | || || | | || || || |||| Sbjct 24061 TGGAT--CCAGTCCCCCGACGCCTCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCG 24118 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| || || ||| || || || ||| ||||| ||| | ||||| || || || | Sbjct 24119 AGGGCGTCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCA 24178 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 ||||||| || |||||| ||| ||| | || || |||||||||||| | || || || | Sbjct 24179 TGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACT 24238 Query 61634 TTGC 61637 | || Sbjct 24239 TCGC 24242 >seq21 Length=10645290 Score = 100 bits (110), Expect = 2e-16 Identities = 285/436 (65%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || ||| | || ||||| ||||| || ||||| |||||| ||||| | || Sbjct 999030 CACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCTCCCGC 999089 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | ||||| || || | ||||| || ||||||||||||||||| || || Sbjct 999090 TTCATGTCCGAGGTCCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCGATC 999149 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||||||||||||| | ||| |||| || |||||| | || | Sbjct 999150 GAGAACATCCACTCGGAGATGTACTCCCTCCTCCTCGAGACCTACATCCGCGACCCCCTC 999209 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 || || || | ||| ||| |||| || | || || || || || | Sbjct 999210 GAGAAGGACCGCCTCTTCCGCGCCGTCGACACCGTCCCCTGCGTCGCCCGCAAGGCCGCG 999269 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| | ||||| ||||| | || || | || | || || | | || | Sbjct 999270 TGGGCGCTGCGCTGGAT--CCAGTCCCCCGACGCCTCCTTCGCCGAGCGCCTCGTCGCCT 999327 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || |||||||| || || ||| || || || ||| ||||| ||| | |||| Sbjct 999328 TCGCCTGCGTCGAGGGCGTCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGA 999387 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || || || |||||||| || |||||| ||| ||| | || || |||||||||||| Sbjct 999388 AGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCC 999447 Query 61622 TGCATTGTGATTTTGC 61637 | || || || || || Sbjct 999448 TCCACTGCGACTTCGC 999463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397552838868560