Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq11 87.8 7e-12 seq4 87.8 7e-12 >seq11 Length=13096665 Score = 87.8 bits (96), Expect = 7e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 21708 GGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAG 21767 || ||| |||||| || | ||| | ||| ||||| || || || ||| | || ||| Sbjct 9021370 GGCGTCATGATGCGCTCGATGATCAATTGAGCGATCCGGTCCCCGGCCTTCACTTGAAAA 9021429 Query 21768 TCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACG 21827 ||| || ||||||||||| |||| || |||||| ||||| || |||||| Sbjct 9021430 TCCAAATCCGAGTGGTTGAACAGCAGGACGCCGACCGGGCCCCGGTAGTCCGCGTCGACC 9021489 Query 21828 ACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGC 21880 ||||| || |||||||||| | ||| |||| | | || || ||||| ||||| Sbjct 9021490 ACCCCCGCCCCGACGTCGATCGCGTGCTTCCACGACAACCCGGATCTCGGAGC 9021542 >seq4 Length=15584765 Score = 87.8 bits (96), Expect = 7e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 21708 GGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAG 21767 || ||| |||||| || | ||| | ||| ||||| || || || ||| | || ||| Sbjct 3026984 GGCGTCATGATGCGCTCGATGATCAATTGAGCGATCCGGTCCCCGGCCTTCACTTGAAAA 3026925 Query 21768 TCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACG 21827 ||| || ||||||||||| |||| || |||||| ||||| || |||||| Sbjct 3026924 TCCAAATCCGAGTGGTTGAACAGCAGGACGCCGACCGGGCCCCGGTAGTCCGCGTCGACC 3026865 Query 21828 ACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGC 21880 ||||| || |||||||||| | ||| |||| | | || || ||||| ||||| Sbjct 3026864 ACCCCCGCCCCGACGTCGATCGCGTGCTTCCACGACAACCCGGATCTCGGAGC 3026812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084653583669942