Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq5 266 8e-69 seq1 266 8e-69 seq10 239 1e-60 seq705 179 9e-43 seq9 174 4e-41 seq6 165 2e-38 seq95 132 1e-28 seq2 122 2e-25 seq8 111 4e-22 seq4 111 4e-22 seq3 86.0 2e-14 >seq5 Length=131469567 Score = 266 bits (294), Expect = 8e-69 Identities = 303/411 (74%), Gaps = 27/411 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 34684737 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 34684678 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34684677 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 34684618 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 34684617 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 34684558 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 34684557 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 34684498 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 34684497 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 34684444 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 34684443 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 34684401 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||||| |||||||| ||||| |||| || ||| ||||||||||||| Sbjct 34684400 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 34684350 >seq1 Length=132393784 Score = 266 bits (294), Expect = 8e-69 Identities = 303/411 (74%), Gaps = 27/411 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 54560323 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 54560264 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54560263 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 54560204 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 54560203 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 54560144 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 54560143 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 54560084 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 54560083 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 54560030 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 54560029 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 54559987 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||||| |||||||| ||||| |||| || ||| ||||||||||||| Sbjct 54559986 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACC 54559936 Score = 98.7 bits (108), Expect = 3e-18 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||||||||| || || ||||||| || ||| ||||||| ||| |||| Sbjct 120004908 CTGCATCTTCACAGACATGTCTATTTCACCAAGCCTCTCTCCGAGACAGTGCCTAGATCG 120004849 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 114 ||| | | ||||||| |||||||||||||||||||||||||||| Sbjct 120004848 TTATGTCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 120004805 >seq10 Length=73452336 Score = 239 bits (264), Expect = 1e-60 Identities = 273/371 (74%), Gaps = 27/371 (7%) Strand=Plus/Minus Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112 ||||||| ||| ||||||||||| ||||| | |||||||||||||||||||||||||| Sbjct 64710751 GAGACAGTGCCCAGATCGTTACGCCTTTCGTACGGGTCGGAACTTACCCGACAAGGAATT 64710692 Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172 ||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||| Sbjct 64710691 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCT 64710632 Query 173 ----TCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228 | | | || | ||| | || |||||||||||| |||||||||||| ||| Sbjct 64710631 CCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCC 64710572 Query 229 ATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTG 288 |||| | ||| || ||||| ||| |||||||||| ||||||||||| |||||| Sbjct 64710571 ATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTG 64710512 Query 289 GTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCT 348 || || ||||| ||| ||| | ||| | |||||| Sbjct 64710511 GTCACTGCGACC------CCCTTTGTGAGGA-----------------GGCACCCCTTCT 64710475 Query 349 CCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGG 408 ||||||||||||| || ||||||| |||||||| ||||| |||| || ||| || Sbjct 64710474 CCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGG 64710415 Query 409 TATTCTCTACC 419 ||||||||||| Sbjct 64710414 TATTCTCTACC 64710404 >seq705 Length=97475 Score = 179 bits (198), Expect = 9e-43 Identities = 132/154 (86%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 18297 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 18238 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18237 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 18178 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 | ||| ||||||||||| |||||| ||||| ||| Sbjct 18177 TAGTTCCGGCCGCCGTTCACCGGGACTTCGGTCA 18144 >seq9 Length=68543460 Score = 174 bits (192), Expect = 4e-41 Identities = 286/418 (68%), Gaps = 42/418 (10%) Strand=Plus/Plus Query 20 CACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCAT 79 ||||| || || |||||||| | ||| ||||||| ||| ||||||||||| | Sbjct 19591540 CACAGACATGTCTATTTCACTAGGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTT 19591599 Query 80 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA- 138 | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 19591600 TTGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAC 19591659 Query 139 -------------CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAG 181 || |||||||| ||||||| |||| || ||| | | | || Sbjct 19591660 GACCGCCGTTCACCGCCCGCCGTTCACCGGGGTTTCGGTCGCCGGCTCCCCTGTCATCAG 19591719 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 | ||| | | |||||||||||| |||||||||||| ||| |||| | ||| Sbjct 19591720 GTCACCAACTTCCTAGACCTTCCGGCACTGGGCAGGCGTCAACCCCCATACATGGTCTTA 19591779 Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG 301 || ||||||||| |||||||||| |||||||| | | ||||||| || ||||| Sbjct 19591780 CGACTTTGCAGAGACCTGTGTTTTTGGTAAACAGTTGTCG-TGCCTGGTCACTGCGACC- 19591837 Query 302 GCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGG 361 ||| ||| | ||| | |||||||||||||||||| Sbjct 19591838 -----CCCTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGA 19591875 Query 362 TGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 || |||| || |||||||| ||||| |||| | ||| |||||||||||| Sbjct 19591876 GGCTATTTTTCCGAGTTCCTTAGAGAGAGTTATCTCGCTCCCCTATGTATTCTCTACC 19591933 Score = 123 bits (136), Expect = 6e-26 Identities = 125/163 (77%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| Sbjct 40635263 ACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTA 40635204 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 ||||| |||||||||||||||| ||| || | ||| ||| | || | | Sbjct 40635203 GAGTTACTACCGCCGTTTACCGGGGTTTCCATTCAAAGC------TTATCACACTTCTGC 40635150 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC 235 ||||||| |||||||||||| |||| || |||||| || Sbjct 40635149 TTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATC 40635107 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||||| || ||||||||||| | |||| | |||||||||| | Sbjct 12550648 TACTCCGCATCTTCACAGAGAATTCAATTTCACCGGGTCTATGTCGGAGACAGCGGGGTA 12550707 Query 67 ATCGTTACGCCATTCGTGCAGGTCG 91 ||||||| |||||||||||||||| Sbjct 12550708 GTCGTTACACCATTCGTGCAGGTCG 12550732 >seq6 Length=78779235 Score = 165 bits (182), Expect = 2e-38 Identities = 211/287 (74%), Gaps = 8/287 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| ||||||||||| || || || ||||||| |||||| | | |||||||| || Sbjct 63288713 TACTCTGCATCTTCATAGAGAATTTAATTTCATTGAGTCCATGTTAGAGACAGCAGGGCA 63288654 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||| ||| |||| ||||| ||||||||||||| |||| ||||||| Sbjct 63288653 GTCGTTACACCATTCACGCATGTCGCTACTTATGCGACAAGGAATTTTGCTAACTTAGGA 63288594 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA-GCTAA 185 | ||| |||| |||||| |||||| ||| ||| || | || || ||| || | Sbjct 63288593 CACTTAGAGTTATTGCCGCCATTTACCTGGGTTTCCATTCAAAGTTT---ATTACACTTA 63288537 Query 186 CCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245 | || | ||||||| |||||| ||||| |||| || |||||| || || | Sbjct 63288536 -TCTTTC---TGACCTTCCAGCACCGAGCAGGTGTCAGACTCTATACATCGTGTTACTAC 63288481 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 || ||||||| |||||||||||||||| ||| || | |||||||| Sbjct 63288480 TTAGCAGAGTCCTGTGTTTTTAATAAATAGTGGCTACCCCCTGGTAT 63288434 >seq95 Length=156380 Score = 132 bits (146), Expect = 1e-28 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112 || |||| ||| ||| ||||||| ||||||| |||| ||||||||| ||||||||||| Sbjct 80805 GAAACAGTGCCCAGATCATTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATT 80746 Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172 || |||||||||||| ||| |||| || ||||||| |||||||||||| || ||| Sbjct 80745 TCTCTACCTTAGGACATTTACAGTTATGGTCGCCGTTCACCGGGGCTTCGGTCGTCGGCT 80686 Query 173 TCGCGTTAGCTAACCCCATCAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 || | | | | ||| ||| || ||||||| | || ||||| || ||| ||| Sbjct 80685 TC-CCTCTCATCAGGCCACCAACTTCCTTGACCTTCCAGTACTGGGCAAGCATCAGCCCC 80627 Query 228 TATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAA 272 |||| | ||| || |||| ||| |||||||||| |||| Sbjct 80626 CATACATGGTCTTACGACTTTGTGGAGACCTGTGTTTTTGGTAAA 80582 >seq2 Length=84732013 Score = 122 bits (134), Expect = 2e-25 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||||||| || || ||||||||||| ||| |||||| ||| ||| Sbjct 6704952 CTGCATCTTCACAAGCATGTCCATTTCACTGAGCCTCTCTCAGAGACATTGCCCATATCA 6704893 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||| || ||||||| ||||||||||||||||| ||||||||| |||||||||| ||| | Sbjct 6704892 TTATACCTTTCGTGCTGGTCGGAACTTACCCGATAAGGAATTTTGCTACCTTAGTACCAT 6704833 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165 ||| ||| | || | || |||| ||||||| || Sbjct 6704832 TATAGTTTCAACCATCATTCACCGAGGCTTCGGTC 6704798 >seq8 Length=131339754 Score = 111 bits (122), Expect = 4e-22 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 40 TGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 99 |||| ||| |||||| | ||| ||||||||| | ||||||| |||| |||| || Sbjct 125445017 TGAGCCTCCCTTGGAGAGGGTGCCTAGATCGTTACGACTTTCGTGCGGGTCAAAACTGAC 125444958 Query 100 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCT 159 |||||||||||||| ||| |||||||||||||| ||| |||| ||||| ||||||||| Sbjct 125444957 CCGACAAGGAATTT-GCTCCCTTAGGACCGTTACAATTATGGCCACCGTTCACCGGGGCT 125444899 Query 160 TCGATC 165 ||| || Sbjct 125444898 TCGGTC 125444893 >seq4 Length=146560859 Score = 111 bits (122), Expect = 4e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||||| |||||||||||||||||||||| |||||| ||||| |||| ||||| Sbjct 137985031 ATCATTACGCCTTTCGTGCAGGTCGGAACTTACCTGACAAGAAATTTTGCTATTGTAGGA 137985090 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 ||||||| |||||| |||||||| ||| |||||| Sbjct 137985091 CCGTTATAGTTACGACCGCCGTTCACCTTAGCTTCG 137985126 >seq3 Length=113259003 Score = 86.0 bits (94), Expect = 2e-14 Identities = 184/271 (68%), Gaps = 12/271 (4%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||||||||| | || |||||| || ||| ||| ||| ||| |||| Sbjct 67643619 CTGTATCTTCACAGACGTGTCTATTTCATCAAGCCTCTCTCTGAGGCAGTGCCCAGATCG 67643678 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||| ||| |||||| ||||| |||||||| | |||||||||| ||||||||||||| | Sbjct 67643679 TTATGCCTTTCGTGTGGGTCGAAACTTACCA-ATAAGGAATTTCACTACCTTAGGACCAT 67643737 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA-AGA---GCTTCGCGTTAGCTAAC 186 ||| || || || | ||| |||| ||| || | || | | || | || Sbjct 67643738 TAT--ATAGTTCC-----TTCACAGGGTTTCGGTCACCGACTCTCCTCTCATCAGGTCAC 67643790 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | || |||||||| ||| || |||||||| ||| ||| | || || | Sbjct 67643791 CGACTTCCTTGACCTTCCGCCACTAGGTAGGCGTCAGCCCCCATAGATGGTTTTACGACT 67643850 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTC 277 ||||| || |||||||||| ||||| ||| Sbjct 67643851 TTGCAAAGACCTGTGTTTTTGGTAAACTGTC 67643881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260651326464