Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1 259 8e-67 seq7 188 1e-45 seq10 168 1e-39 seq6 168 1e-39 seq3 150 3e-34 >seq1 Length=132393784 Score = 259 bits (286), Expect = 8e-67 Identities = 222/273 (81%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 54561063 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 54561004 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 54561003 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 54560944 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||| | |||||| ||||||||||||||| || Sbjct 54560943 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCGCACCGGATATGGACCGAACTGTCTCACG 54560884 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 54560883 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 54560824 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || |||||||||| | || |||||||||||| Sbjct 54560823 GCTACAGCCCCAGGTGGCGAAGAGCCGACATCG 54560791 >seq7 Length=151357931 Score = 188 bits (208), Expect = 1e-45 Identities = 178/226 (79%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 58462057 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 58462116 Query 64 ATGCACTTGG-CAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | ||||| || | ||||||| |||||||||| |||| |||| ||||||||||||| Sbjct 58462117 TTTACCTTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCCGTCCTCTCGTACT 58462176 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||| | ||||| |||| |||||||||| || Sbjct 58462177 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCTCACTGGATATGGACTGAACTGTCTCACG 58462236 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228 ||||||||||||||| || ||| || ||||||||||||||| |||| Sbjct 58462237 ACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCGAACTGCCC 58462282 Score = 107 bits (118), Expect = 3e-21 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 112 CCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGA 171 || ||||||||| ||| || ||||||||| || |||||| | ||||| |||| || Sbjct 58462280 CCCCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCTCACTGGATATGGACTGA 58462339 Query 172 ACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCG 220 |||||||| ||||||||||||||||| || ||| || |||||||||||| Sbjct 58462340 ACTGTCTCACGACGTTCTGAACCCAGTTCACGTACCGCTTTAATGGGCG 58462388 >seq10 Length=73452336 Score = 168 bits (186), Expect = 1e-39 Identities = 194/259 (75%), Gaps = 14/259 (5%) Strand=Plus/Minus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | ||||||||| ||| ||| || |||||| ||||| ||| | Sbjct 9746844 CAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCT--GCTATTGGCATAACAACCGGTAC 9746787 Query 89 ACCAGAGGT-------TTGTCC-ATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAA 140 |||| |||| ||| || | ||| |||||||||||||| || ||||||| || Sbjct 9746786 ACCATAGGTCCATAGGTTGACCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAG 9746727 Query 141 ATTTCCT----ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196 | ||| || | ||| |||||| ||||||||||||| ||||||||| |||||| Sbjct 9746726 TTCTCCCTTTAACACTAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCA 9746667 Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 | | ||| || |||| || |||||||| || |||||||||||||| ||||| ||||||| Sbjct 9746666 ACCCACGTACCACTTTCATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGG 9746607 Query 257 ATGAGACGAGCCGACATCG 275 ||| || ||| |||||||| Sbjct 9746606 ATGTGATGAGTCGACATCG 9746588 >seq6 Length=78779235 Score = 168 bits (186), Expect = 1e-39 Identities = 202/273 (74%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| |||||||| |||||| |||||| |||| |||| ||| |||| | Sbjct 3705685 GGTGGGCTTATTACTTAGATGTTTTCAGCAGTTATCCATTCCGCACTTCGCTCCCCAACG 3705744 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||| | |||| || ||| |||||| ||| ||| | ||||||| |||| Sbjct 3705745 TTTATTGTGGGCACAATAACTAGTACACGAGAGGTGCATCCTTCCTGATCCTCTCATACT 3705804 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | || || || |||||||| || |||| ||| |||||| | ||| ||||||||| | Sbjct 3705805 AGGGCAAGGTCTTCTCAAATCTCTAACGCACACATCGGATATGTACCAAACTGTCTCACA 3705864 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 || ||||||||| ||||| ||| | ||||||||| |||||| |||||||||||| || | Sbjct 3705865 ACATTCTGAACCTAGCTCACGTACTGCTTTAATGGTCGAACAACCCAACCCTTGGAACAT 3705924 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||||| | | | ||||||| |||| Sbjct 3705925 GCTATAGCCCCAAGTGGCAAAGAGCCGAAATCG 3705957 Score = 149 bits (164), Expect = 1e-33 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| ||| | ||| || ||| ||||||||| ||||| ||||| | | | Sbjct 63289385 AACTTAGCTGCCCGACGCTGCTATTAGCATAACAACTGGTACACCATAGGTTGACCAAAC 63289326 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCC----TACGCCCACGACGGAT 162 | |||||||||||||| || ||||||| || | ||| || || ||| ||| Sbjct 63289325 CTAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGAT 63289266 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||| ||||||||| || ||||| |||||| || ||| || |||| || ||||| Sbjct 63289265 AGGAACCAAACTGTCTCATGATGTTCTAAACCCAATTCACGTACCACTTTCATCAGCGAA 63289206 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || ||||||||| |||| |||| |||||||||| || ||| |||||||| Sbjct 63289205 CAACCGAACCCTTGGAACCTTTTTCAACCCCAGGATGTGATGAGTCGACATCG 63289153 >seq3 Length=113259003 Score = 150 bits (166), Expect = 3e-34 Identities = 156/198 (79%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 || |||| |||||||| | |||| || || ||||||||||||| ||| || |||||| | Sbjct 67642970 AATTGGTACACCAGAGATG-GTCCTTCTCGATCCTCTCGTACTAGGGAAAGGTCCTCTTA 67643028 Query 140 AATTTCCTACGCC-CACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGC 198 | || ||||| ||| |||||| ||| |||| |||||| | || ||||||| ||||| Sbjct 67643029 ATGCTCTAACGCCTCAC--CGGATATGGAACGAATTGTCTCACAACATTCTGAATCCAGC 67643086 Query 199 TCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGAT 258 || | | | ||||||||||||||||||||||||||| | || | || || ||||| || Sbjct 67643087 TCTCATATCACTTTAATGGGCGAACAGCCCAACCCTTAGAACATGCTACAACCCCA-AAT 67643145 Query 259 GA-GACGAGCCGACATCG 275 || || |||||||||||| Sbjct 67643146 GACGAAGAGCCGACATCG 67643163 Score = 138 bits (152), Expect = 2e-30 Identities = 100/116 (86%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||| ||||||||||||| ||||||||| |||||| ||| ||| || |||| || ||| Sbjct 106769304 GATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTCATCGGC 106769363 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||| || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 106769364 GAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 106769419 Score = 131 bits (144), Expect = 3e-28 Identities = 97/112 (87%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 165 GGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224 ||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||| Sbjct 3344010 GGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACA 3343951 Query 225 GCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGA-GCCGACATCG 275 |||||||||| | || | || |||||||||| | || || |||||||||| Sbjct 3343950 ACCCAACCCTTAGAACATGCTACAGCCCCAGGTGGCGAAGAGGCCGACATCG 3343899 Score = 107 bits (118), Expect = 3e-21 Identities = 71/78 (91%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 164 GGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAAC 223 |||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||| Sbjct 3344081 GGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAAC 3344022 Query 224 AGCCCAACCCTTGGGACC 241 | ||||||||| ||||| Sbjct 3344021 AACCCAACCCT--GGACC 3344006 Score = 104 bits (114), Expect = 4e-20 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 || ||||||||| || |||||| | || | | |||||||||| |||| || || | Sbjct 97835955 AGGTCCTCTCAATGCTCGAACGCCCGCACCGTACATGGACCGAACTATCTCATGATGTGC 97835896 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||| | ||||| ||| || |||||||||||||||| ||||||| || | | | || | Sbjct 97835895 TGAAGCTAGCTCACGTACCACTTTAATGGGCGAACAACCCAACCTTTAGAATATGCTATA 97835836 Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275 |||| ||| | || |||||||||||| Sbjct 97835835 GCCCTAGGTGGCGAAGAGCCGACATCG 97835809 Score = 84.2 bits (92), Expect = 3e-14 Identities = 120/165 (73%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 110 GTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACC 169 ||| |||| |||| ||| || |||||| || || | || ||| || |||| || | Sbjct 91811721 GTCTTCTCACACTAGGGAAAGGTCCTCTTAATGCTCTAATGCTCAC-ACCGATATAGATC 91811779 Query 170 GAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCA 229 || ||||| ||| ||||||||||||||| | | || ||||||||||| || | ||| Sbjct 91811780 -AATTGTCTTAAGACATTCTGAACCCAGCTCCCATACCGCTTTAATGGGCAAAGAAGCCA 91811838 Query 230 ACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATC 274 | |||||| || | || ||||| ||| | || ||| ||||||| Sbjct 91811839 A-CCTTGGAACATGCTATAGCCCTAGGTGGTGAAGAGTCGACATC 91811882 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 217 GGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 106769029 GGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 106769087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780710805312