Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1 194 6e-47 seq5 145 3e-32 seq10 136 1e-29 seq705 129 2e-27 seq9 122 3e-25 seq6 102 3e-19 seq4 100 1e-18 seq95 98.7 3e-18 seq8 86.0 2e-14 seq2 84.2 7e-14 >seq1 Length=132393784 Score = 194 bits (214), Expect = 6e-47 Identities = 391/569 (69%), Gaps = 21/569 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 54560656 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCTTTGCACTCGAGGGCCAATCTCC 54560597 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 54560596 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 54560538 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 54560537 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 54560478 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCAC--TAGCGTGGCCGCATC 235 | | ||||||||||| ||| | | ||| || | || | |||| || Sbjct 54560477 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGTAAGGAGGCCTTCTC 54560418 Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293 | || ||||||| || | || || || | || |||||| ||| | | ||||| Sbjct 54560417 C--GCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGA 54560362 Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352 || | | |||||||| |||| | || | | ||||||| || | | || Sbjct 54560361 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 54560302 Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411 ||||||| |||| | ||||||| | || |||||||||| ||||||| ||||||| Sbjct 54560301 TTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 54560243 Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 54560242 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 54560183 Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531 |||||||| | ||| ||| || || | | |||| | ||| |||||| Sbjct 54560182 GGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTC 54560129 Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | |||| ||||||||||||| || |||| Sbjct 54560128 CGGCACTGGGCAGGCGTCAGCCCCCATAC 54560100 >seq5 Length=131469567 Score = 145 bits (160), Expect = 3e-32 Identities = 213/296 (72%), Gaps = 9/296 (3%) Strand=Plus/Minus Query 267 CCGAATGCCAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGA 325 || || |||||| ||| | | ||||||| | | |||||||| |||| | || | Sbjct 34684802 CCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGT 34684743 Query 326 AACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG 385 | ||||||| || | | ||||||||| |||| | ||||||| | || Sbjct 34684742 AGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAG 34684684 Query 386 -TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 34684683 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 34684624 Query 445 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTG 504 ||||||||||| |||||||| || |||||||| | ||| ||| || || Sbjct 34684623 CCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC-GGTCGCCGGCTC-----CCCTGTC 34684570 Query 505 GTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||| ||||||| |||| ||||||||||||| || |||| Sbjct 34684569 ATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 34684514 >seq10 Length=73452336 Score = 136 bits (150), Expect = 1e-29 Identities = 136/175 (78%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 64710736 TCGTTACGCCTTTCGTACGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 64710677 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 ||||||||||| |||||||| || |||||||| | ||| ||| || || Sbjct 64710676 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCA 64710623 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||| ||||||| |||| ||||||||||||| || |||| Sbjct 64710622 TCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 64710568 >seq705 Length=97475 Score = 129 bits (142), Expect = 2e-27 Identities = 108/130 (83%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||||| Sbjct 18277 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 18219 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| | Sbjct 18218 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTCCGGCCGCCGTTCA 18159 Query 470 CTGGGGCTTC 479 | ||| |||| Sbjct 18158 CCGGGACTTC 18149 >seq9 Length=68543460 Score = 122 bits (134), Expect = 3e-25 Identities = 78/85 (92%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 19591588 TCGTTACGCCTTTTGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 19591647 Query 446 GGTTATAGTTACCACCGCCGTTTAC 470 ||||||||||| ||||||||| || Sbjct 19591648 CGTTATAGTTACGACCGCCGTTCAC 19591672 Score = 122 bits (134), Expect = 3e-25 Identities = 131/174 (75%), Gaps = 16/174 (9%) Strand=Plus/Minus Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 450 || |||||||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct 40635263 ACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTA 40635204 Query 451 TAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGC 510 |||||| |||||||||||| |||| ||| ||| || | ||||| | ||| Sbjct 40635203 GAGTTACTACCGCCGTTTACCGGGGTTTCCATTCAAAGCTTATCACAC------TTCTGC 40635150 Query 511 TCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 | ||| |||||||||||||||||||| ||||| | ||||| ||| Sbjct 40635149 T------TCC----GACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCG 40635106 Score = 105 bits (116), Expect = 2e-20 Identities = 226/333 (68%), Gaps = 26/333 (8%) Strand=Plus/Plus Query 87 CCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCC 146 |||||||||| |||| ||||| || ||||||||| ||||||||||||| ||| |||||| Sbjct 12550416 CCTCCGTTACTTTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCC 12550474 Query 147 ----CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGAGTGGTATTTC 200 | ||| || || || | |||||| |||| | |||||||| |||| Sbjct 12550475 GCCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTC 12550534 Query 201 AACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAA 260 | | | || | | ||| | || | |||||||||||||||||| Sbjct 12550535 AGGATTGG-TCG--------TTGTGTGTCACCACC------TCCCACCTATCCTACACAT 12550579 Query 261 ACCGCACCGAATGCCAATACCAAGCTATAGT---GAAGGTCC-CGGGGTCTTTTCGTCCT 316 | | || || | | |||||||||| |||||| | ||||||||| |||| Sbjct 12550580 TCGATCAAGGTTGTCACTGCGAAGCTATAGTCAGGAAGGTGCACGGGGTCTTACCGTCTA 12550639 Query 317 GCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACA 376 |||| | | ||||||| || | | ||||||||||||| || || |||||| Sbjct 12550640 GCCGTTGGTACTCCGCATCTTCACAGAGAATTCAATTTCACCGGGTCTATGTCGGAGACA 12550699 Query 377 GCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 || ||| ||||||||| |||||||||||||||| Sbjct 12550700 GCGGGGTAGTCGTTACACCATTCGTGCAGGTCG 12550732 >seq6 Length=78779235 Score = 102 bits (112), Expect = 3e-19 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 ||||||| | | | || | |||||||||||| ||||||||| |||||| ||| |||| Sbjct 63288688 AATTTCATTGAGTCCATGTTAGAGACAGCAGGGCAGTCGTTACACCATTCACGCATGTCG 63288629 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||||||||||||| |||| ||||||| ||| ||||| ||||| |||| Sbjct 63288628 CTACTTATGCGACAAGGAATTTTGCTAACTTAGGACACTTAGAGTTATTGCCGCCATTTA 63288569 Query 470 CTGGGGCTTCAATT 483 | ||| ||| ||| Sbjct 63288568 CCTGGGTTTCCATT 63288555 >seq4 Length=146560859 Score = 100 bits (110), Expect = 1e-18 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| |||||||||||||||||||||| |||||| ||||| |||| ||||| Sbjct 137985032 TCATTACGCCTTTCGTGCAGGTCGGAACTTACCTGACAAGAAATTTTGCTATTGTAGGAC 137985091 Query 446 GGTTATAGTTACCACCGCCGTTTAC 470 ||||||||||| ||||||||| || Sbjct 137985092 CGTTATAGTTACGACCGCCGTTCAC 137985116 >seq95 Length=156380 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| ||||||| |||| ||||||||| ||||||||||||| ||||||||||| Sbjct 80790 TCATTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCTCTACCTTAGGAC 80731 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||| ||||| ||||||| || |||||||| Sbjct 80730 ATTTACAGTTATGGTCGCCGTTCACCGGGGCTTC 80697 >seq8 Length=131339754 Score = 86.0 bits (94), Expect = 2e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||| | ||||||| |||| |||| |||||||||||||||| ||| |||||||| Sbjct 125444989 TCGTTACGACTTTCGTGCGGGTCAAAACTGACCCGACAAGGAATTT-GCTCCCTTAGGAC 125444931 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||| | ||| || ||||| || |||||||| Sbjct 125444930 CGTTACAATTATGGCCACCGTTCACCGGGGCTTC 125444897 >seq2 Length=84732013 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||| || ||||||| ||||||||||||||||| ||||||||| |||||||||| | Sbjct 6704895 TCATTATACCTTTCGTGCTGGTCGGAACTTACCCGATAAGGAATTTTGCTACCTTAGTAC 6704836 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||| | ||| | || || | |||||| Sbjct 6704835 CATTATAGTTTCAACCATCATTCACCGAGGCTTC 6704802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702199252992