Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 4e-38
>seq2
Length=84732013
Score = 172 bits (190), Expect = 4e-38
Identities = 555/850 (65%), Gaps = 31/850 (4%)
Strand=Plus/Plus
Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155
|||||||| ||||| || || || |||||||| | |||||||||||| | | ||||
Sbjct 24868130 ATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATCTCAGCCAAGAT 24868189
Query 61156 ATGAATGACTGGGAGCGTT---TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTG 61212
|| ||||||| | || | || || | || ||| | | || || |
Sbjct 24868190 ATCCGCCACTGGGACCAAACCCTAACCGCCGACGAGCGCCACTTCGTCACCCACGTCCTC 24868249
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | |||||| | ||
Sbjct 24868250 GCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAGAACCTCGCCGGCCGTTTCATGAAG 24868309
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
||||| || || | ||||| | ||||||||||||||||| ||||| ||||| ||
Sbjct 24868310 GAGGTCCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 24868369
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGA 61391
||||| ||||||||| ||||| |||| | ||||||| ||| | | | || | |
Sbjct 24868370 CACTCCGAGATGTACTCGCTTCTCCTCGAATCCTACATCAAGGACTCCGATGAAAAGAG- 24868428
Query 61392 ACGATTGTTCAATGCCATCGAGACGATACC-GGCG--GTGAAGCGGAAAGCGGATTGGGC 61448
|| | || | ||||||||||| || || ||| | || ||| || || |||||
Sbjct 24868429 CCGCCTTTTTCACGCCATCGAGACCATCCCTTGCGTCGCCAA---GAAGGCCGAGTGGGC 24868485
Query 61449 CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGT 61508
| || |||||| | || | || || | || ||||| | || |||||
Sbjct 24868486 GCTGAAGTGGATCGATGGCTCAGAGTCT---TTCGCCGAGAGATTGATCGCTTTTGCTTG 24868542
Query 61509 GGTCGAGGGTGTATTTTTC-AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567
||||| || | || ||| ||| | |||| || || || ||| | || || || |
Sbjct 24868543 CGTCGAAGGGATTTTCTTCTCCGGGAGCTTTTG-TGCCATTTTCTGGCTTAAAAAGCGCG 24868601
Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATT 61627
|| | ||||| || | ||||| || ||| | ||||| || ||||| ||| | ||||
Sbjct 24868602 GATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAGACGAAGGCCTCCATT 24868661
Query 61628 GTGATTTTGCT--GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG----G 61681
| ||||| ||| || | ||||| |||| |||| | | | ||| |
Sbjct 24868662 GCGATTTCGCTTGCTTGTTGTATTC--------TCTGCTGAA-CAACAAGCTGAGCGAAG 24868712
Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741
|| ||||| | |||||| || || || |||||||| ||| ||| | || |
Sbjct 24868713 AGAGTGTGAAGGGGATTGTGAAGGATGCTGTTGATATCGAACGGGAGTTTGTTTGCGATG 24868772
Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801
|| |||| || | | |||| |||||| | | || ||| | ||||||||||| |
Sbjct 24868773 CTCTGCCGGTTGCTTTGGTCGGGATGAATGGGGATCTGATGAGTGAATATATTGAATTCG 24868832
Query 61802 TTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCAT 61861
| || ||||| |||||| | |||||| || | | | ||| | ||||| |
Sbjct 24868833 TGGCTGACCGCTTGTTGGGGGCTTTGGGGATTGAAAAGTTGTATGGAGCTTCGAACCCGT 24868892
Query 61862 TTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAG 61921
|||||| ||||| |||||||| || | || |||||||| || |||||||| | ||||
Sbjct 24868893 TTGATTGGATGGAGTTGATTTCGTTGCAGGGGAAGACGAACTTCTTCGAGAAGAGGGTAG 24868952
Query 61922 GCGACTATCA 61931
| || || ||
Sbjct 24868953 GGGATTACCA 24868962
Score = 172 bits (190), Expect = 4e-38
Identities = 555/850 (65%), Gaps = 31/850 (4%)
Strand=Plus/Minus
Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155
|||||||| ||||| || || || |||||||| | |||||||||||| | | ||||
Sbjct 26603496 ATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGGTCGATCTCAGCCAAGAT 26603437
Query 61156 ATGAATGACTGGGAGCGTT---TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTG 61212
|| ||||||| | || | || || | || ||| | | || || |
Sbjct 26603436 ATCCGCCACTGGGACCAAACCCTAACCGCCGACGAGCGCCACTTCGTCACCCACGTCCTC 26603377
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | |||||| | ||
Sbjct 26603376 GCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAGAACCTCGCCGGCCGTTTCATGAAG 26603317
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
||||| || || | ||||| | ||||||||||||||||| ||||| ||||| ||
Sbjct 26603316 GAGGTCCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 26603257
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGA 61391
||||| ||||||||| ||||| |||| | ||||||| ||| | | | || | |
Sbjct 26603256 CACTCCGAGATGTACTCGCTTCTCCTCGAATCCTACATCAAGGACTCCGATGAAAAGAG- 26603198
Query 61392 ACGATTGTTCAATGCCATCGAGACGATACC-GGCG--GTGAAGCGGAAAGCGGATTGGGC 61448
|| | || | ||||||||||| || || ||| | || ||| || || |||||
Sbjct 26603197 CCGCCTTTTTCACGCCATCGAGACCATCCCTTGCGTCGCCAA---GAAGGCCGAGTGGGC 26603141
Query 61449 CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGT 61508
| || |||||| | || | || || | || ||||| | || |||||
Sbjct 26603140 GCTGAAGTGGATCGATGGCTCAGAGTCT---TTCGCCGAGAGATTGATCGCTTTTGCTTG 26603084
Query 61509 GGTCGAGGGTGTATTTTTC-AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567
||||| || | || ||| ||| | |||| || || || ||| | || || || |
Sbjct 26603083 CGTCGAAGGGATTTTCTTCTCCGGGAGCTTTTG-TGCCATTTTCTGGCTTAAAAAGCGCG 26603025
Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATT 61627
|| | ||||| || | ||||| || ||| | ||||| || ||||| ||| | ||||
Sbjct 26603024 GATTGATGCCGGGGTTAACCTTTTCAAACGAGCTCATATCTCGAGACGAAGGCCTCCATT 26602965
Query 61628 GTGATTTTGCT--GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG----G 61681
| ||||| ||| || | ||||| |||| |||| | | | ||| |
Sbjct 26602964 GCGATTTCGCTTGCTTGTTGTATTC--------TCTGCTGAA-CAACAAGCTGAGCGAAG 26602914
Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741
|| ||||| | |||||| || || || |||||||| ||| ||| | || |
Sbjct 26602913 AGAGTGTGAAGGGGATTGTGAAGGATGCTGTTGATATCGAACGGGAGTTTGTTTGCGATG 26602854
Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801
|| |||| || | | |||| |||||| | | || ||| | ||||||||||| |
Sbjct 26602853 CTCTGCCGGTTGCTTTGGTCGGGATGAATGGGGATCTGATGAGTGAATATATTGAATTCG 26602794
Query 61802 TTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCAT 61861
| || ||||| |||||| | |||||| || | | | ||| | ||||| |
Sbjct 26602793 TGGCTGACCGCTTGTTGGGGGCTTTGGGGATTGAAAAGTTGTATGGAGCTTCGAACCCGT 26602734
Query 61862 TTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAG 61921
|||||| ||||| |||||||| || | || |||||||| || |||||||| | ||||
Sbjct 26602733 TTGATTGGATGGAGTTGATTTCGTTGCAGGGGAAGACGAACTTCTTCGAGAAGAGGGTAG 26602674
Query 61922 GCGACTATCA 61931
| || || ||
Sbjct 26602673 GGGATTACCA 26602664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397510863514880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |