Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq28 219 1e-54 seq1 219 1e-54 seq4 208 2e-51 seq3 197 4e-48 seq5 84.2 6e-14 >seq28 Length=135199 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 91455 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 91514 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 91515 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 91574 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 91575 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 91634 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 91635 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 91694 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 91695 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 91754 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 91755 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 91814 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 91815 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 91863 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 123192 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 123133 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 123132 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 123073 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 123072 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 123013 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 123012 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 122953 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 122952 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 122893 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 122892 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 122833 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 122832 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 122784 >seq1 Length=75119905 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 35976055 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 35976114 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 35976115 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 35976174 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 35976175 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 35976234 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 35976235 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 35976294 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 35976295 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 35976354 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 35976355 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 35976414 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 35976415 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 35976463 Score = 147 bits (162), Expect = 6e-33 Identities = 135/171 (79%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||| ||||| | ||||| | |||||||| | |||||| ||||||| ||||||| | Sbjct 46315266 ACTTGAGTGAGATAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTAC 46315325 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | |||||| |||| ||||||||||| | ||||| || |||||| | |||||| Sbjct 46315326 GAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAG 46315385 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | |||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct 46315386 CATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 46315436 Score = 141 bits (156), Expect = 2e-31 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||| |||||||| || ||| ||| Sbjct 5487617 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAATCGCGGTAAGACAGAGGATGC 5487676 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | || || | | ||| | | || Sbjct 5487677 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGCTGGCTTTTCAAGTCCGCCGT 5487736 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| ||| | | ||| | || |||| | || Sbjct 5487737 CAAATCCCAGGGCTCAACCCTGGACAGGCAGTGGAAACTACCAAGCTGGAGTACGGTAGG 5487796 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 5487797 GGCAGAGGGAATTTCTGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 5487856 Query 243 CGAAGGCAGCCCCCTGGG 260 |||| ||| | |||||| Sbjct 5487857 CGAAAGCACTCTCCTGGG 5487874 Score = 122 bits (134), Expect = 2e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| ||||||||| | || || | | ||||||||| |||||| || Sbjct 35894190 GGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGC 35894249 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||||| || | |||||||| |||||||||| |||||||| Sbjct 35894250 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGA 35894309 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTT 367 |||| ||||||| ||| |||||||| ||||| || || | || | || || | Sbjct 35894310 GACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGAC--CCGT 35894367 Query 368 G--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || ||||||||||||| |||| ||||||||||| ||| Sbjct 35894368 GCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 35894411 Score = 120 bits (132), Expect = 8e-25 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||||||||| ||||||||| ||||||||||||||||||| || ||| |||||||| Sbjct 15373044 GAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCG 15372985 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAAT 127 ||| |||||| | |||||||||||||| | ||| || | | ||| | | || |||| Sbjct 15372984 TTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAAT 15372925 Query 128 CCCCGGGCTTAACC 141 ||| ||||| |||| Sbjct 15372924 CCCAGGGCTCAACC 15372911 Score = 116 bits (128), Expect = 1e-23 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| |||||||||||| |||||| || ||| ||| Sbjct 43398460 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCACGGTAAGACAGAGGATGC 43398401 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 43398400 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCTGCCGT 43398341 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| | ||| |||| Sbjct 43398340 CAAATCCCAGTGCTCAACC 43398322 Score = 91.5 bits (100), Expect = 4e-16 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||| | || || | | ||||||||| |||||| || Sbjct 17812138 GGAATTTCCGGTGGAGCGATGAAATGCATTGAGATCAGAAAGAACACCAACGGCGAAAGC 17812197 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| ||||||||||| | |||||||| ||||| |||| |||||| | Sbjct 17812198 ACTCTGCTGGGCCGACACTGACGCTGAGAGACGAAAGCTAGGGGAACAAATGGGATTAAA 17812257 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 |||| |||||| ||| |||||||| Sbjct 17812258 GACCCCAATAGTCCTAGCCGTAAACGAT 17812285 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| |||| ||||||||| | | ||||| ||||||||||||||||||| || | | || Sbjct 6217092 ATATCTGAGGAATAAGCATCAGATAACTCTGTGCCAGCAGCCGCGGTAAGACAAATGATG 6217151 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAA 91 |||| |||| || ||| | |||||||||| Sbjct 6217152 CAAGTGTTATCCGAAATGATTGGGCGTAAA 6217181 >seq4 Length=48772488 Score = 208 bits (230), Expect = 2e-51 Identities = 292/409 (71%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||| ||||||| ||| || ||| ||| Sbjct 19631539 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGTAGCCGCGATAAGACAGAGGATGC 19631480 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| ||||| | |||||||||||||| | ||| || | | ||| | | ||| Sbjct 19631479 AAGCGTTATCTGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCTGT 19631420 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 19631419 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 19631360 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 19631359 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 19631300 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 19631299 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 19631240 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || Sbjct 19631239 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTAGA 19631180 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||| ||| |||| ||||||||||| ||| Sbjct 19631179 CCCGTGCAGTGTTGTAGCTAACACGTTAAGTATCCCGCCTGGGGAGTAC 19631131 >seq3 Length=59935730 Score = 197 bits (218), Expect = 4e-48 Identities = 296/412 (72%), Gaps = 9/412 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 26500103 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 26500162 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 26500163 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC-GCCGT 26500221 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAG 181 ||||||| ||||| |||| ||| || | | ||| || | || ||| || || Sbjct 26500222 CAAATCCCAGGGCTCAACCATGGACAGGCGGTGGAAACTAACAAG-CTGCAGTATGGTAG 26500280 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | || ||| ||| ||||| | || || | | ||||||||| | Sbjct 26500281 GGGCAGAGGGAATTTCCGATGGAGCGGTGGAATGCATTGAGATCGGAAAGAACACCAACG 26500340 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| ||| | ||||| |||||||| || | |||||||| |||||||||| Sbjct 26500341 GCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATG 26500400 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTT 359 || ||||| |||| ||||||| ||| |||||||| ||||| || || | || | Sbjct 26500401 GGGTTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCG 26500460 Query 360 ACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || || ||||||||||||| || | ||||||||||| ||| Sbjct 26500461 AC--CCGTGCAGTGCTGTAGCTAACGCGTTAAATATCCCGCCTGGGGAGTAC 26500510 Score = 116 bits (128), Expect = 1e-23 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| ||| Sbjct 32570519 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGAGAGAGGATGC 32570460 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||| ||| | ||| || | | ||| | | || Sbjct 32570459 AAGCGTTATCCGGAATGATTGGGCGTAAAACGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 32570400 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 32570399 CAAATCCCAGGGCTCAACC 32570381 Score = 78.8 bits (86), Expect = 2e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 36 CAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 ||||||||||||||| || ||| ||||||||||| |||||| | ||| |||||||||| Sbjct 36700837 CAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGACGTAAAGCGT 36700778 Query 96 GCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 | ||| || | | ||| | | || ||||||| | ||| |||| Sbjct 36700777 CTGTAGGTGGCTTTTCAAGTCTGCCGTCAAATCCCAGTGCTCAACC 36700732 >seq5 Length=28563423 Score = 84.2 bits (92), Expect = 6e-14 Identities = 103/139 (74%), Gaps = 5/139 (4%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| |||||| || ||||||||||||| ||||| || | ||| Sbjct 17647296 TATCTGAGGAATAAGCATCGGCTAGCTCTGTGCCAGCAGCCGTGGTAAGACAGGAGATGC 17647355 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||| |||| || ||| ||||| |||||||||| | | ||| | ||| | | || Sbjct 17647356 AAGTGTTATCCGAAATGACTGGACGTAAAGCGT---CTGTGGGT--GGCAAGTCCGCCGT 17647410 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 17647411 GAAATCCGAGGGCTCAACC 17647429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289599638912