Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq28 435 9e-120 seq1 435 9e-120 seq3 432 1e-118 seq4 295 2e-77 seq2 163 9e-38 seq5 102 2e-19 >seq28 Length=135199 Score = 435 bits (482), Expect = 9e-120 Identities = 397/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 91861 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 91920 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 91921 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 91980 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 91981 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 92038 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 92039 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 92098 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 92099 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 92157 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 92158 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 92217 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||||||| ||| || ||| ||| || |||||||||||||| Sbjct 92218 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 92277 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 92278 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 92337 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 92338 CGGTGAATCCGTTCCCG 92354 Score = 435 bits (482), Expect = 9e-120 Identities = 397/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 122786 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 122727 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 122726 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 122667 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 122666 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 122609 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 122608 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 122549 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 122548 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 122490 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 122489 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 122430 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||||||| ||| || ||| ||| || |||||||||||||| Sbjct 122429 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 122370 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 122369 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 122310 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 122309 CGGTGAATCCGTTCCCG 122293 >seq1 Length=75119905 Score = 435 bits (482), Expect = 9e-120 Identities = 397/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 35894409 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 35894468 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 35894469 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 35894528 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 35894529 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 35894586 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 35894587 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 35894646 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 35894647 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 35894705 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 35894706 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 35894765 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||||||| ||| || ||| ||| || |||||||||||||| Sbjct 35894766 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 35894825 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 35894826 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 35894885 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 35894886 CGGTGAATCCGTTCCCG 35894902 Score = 435 bits (482), Expect = 9e-120 Identities = 397/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 35976461 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 35976520 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 35976521 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 35976580 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 35976581 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 35976638 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 35976639 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 35976698 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 35976699 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 35976757 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 35976758 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 35976817 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||||||| ||| || ||| ||| || |||||||||||||| Sbjct 35976818 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 35976877 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 35976878 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 35976937 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 35976938 CGGTGAATCCGTTCCCG 35976954 Score = 179 bits (198), Expect = 1e-42 Identities = 179/231 (77%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||| ||||||| || ||||||||||| | ||| || | ||| ||||||||||||||||| Sbjct 67645628 GACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCCCTTATG 67645687 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||||||||||||||| | |||||||| |||| ||||||| | Sbjct 67645688 CCCTGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCGAGGGTGA 67645747 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || || ||| ||| | || |||||| |||| || |||||||||| || ||||||| Sbjct 67645748 GCTAACTCCAAAAACCCATCCTTAGTTCGAATTGCAGGCTGCAACTCGGCTGCATGAAGC 67645807 Query 447 TGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACGTTCCCG 496 ||||||||||||||||| | |||| ||| | |||||||| | |||||| Sbjct 67645808 AGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCATTCCCG 67645858 Score = 163 bits (180), Expect = 9e-38 Identities = 177/234 (76%), Gaps = 17/234 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || ||||||| |||||||||| Sbjct 46315504 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGTGGTGGAGCAT 46315563 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 46315564 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 46315614 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| ||| || || || | ||||||| ||||||| || Sbjct 46315615 -ACAACAAAACCTGTCCTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTG 46315673 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 46315674 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 46315727 Score = 91.5 bits (100), Expect = 4e-16 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 38673128 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 38673069 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGG 289 ||| | |||| || || || | ||| ||||||| || ||||||| Sbjct 38673068 CAT--ATGAGTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGG 38673022 >seq3 Length=59935730 Score = 432 bits (478), Expect = 1e-118 Identities = 396/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 20779150 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 20779091 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 20779090 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 20779031 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 20779030 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 20778973 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 20778972 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 20778913 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 20778912 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 20778854 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 20778853 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 20778794 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||| ||| || ||| ||| || |||||||||||||| Sbjct 20778793 AAAGGGTCGCGATCTTGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 20778734 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 20778733 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 20778674 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 20778673 CGGTGAATCCGTTCCCG 20778657 Score = 432 bits (478), Expect = 1e-118 Identities = 396/497 (80%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 26500508 TACGTTCGCAAGAATGAAACTCAAAGGAATTGATGGGGGCCCGCACAAGCGGTGGAGCAT 26500567 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 26500568 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 26500627 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 26500628 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 26500685 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 26500686 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 26500745 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 26500746 CACTATGA-GTTTGGAACCCTGAACGGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 26500804 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 26500805 GAGGCCAATTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 26500864 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| | ||||| ||| || ||| ||| ||| |||||||||||||| Sbjct 26500865 AAAGGGTTGCGATCTCACGAGGGTGAGCTAACTCCAAAAACCTGTCCTCAGTTCGGATTG 26500924 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 26500925 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 26500984 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 26500985 CGGTGAATCCGTTCCCG 26501001 Score = 192 bits (212), Expect = 2e-46 Identities = 180/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15 TGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA 74 |||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 7641510 TGAAACTCGAAAGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGCGGTTTAATTCGA 7641569 Query 75 AGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTT 134 |||| | |||||||||||||| | |||||| | || ||||| || | ||||| Sbjct 7641570 TGCAAAGTGAAGAACCTTACCAGGACATGACATGCCGCGAATCCTCTTGAAAGAGAGGGG 7641629 Query 135 TCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGA 194 | |||| ||| || | |||| || |||||| |||||||||||| || ||| || Sbjct 7641630 TGCCCT--CGGGAACGCGGACACAGATGGTGCATGCCTGTCGTCAGCTCATGCCGTAAGG 7641687 Query 195 TGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242 |||||| ||||||| |||||||| | ||||||| | |||||||||| Sbjct 7641688 TGTTGGATTAAGTCTCGCAACGAACCCAACCCTCGTGTTTAGTTGCCA 7641735 Score = 116 bits (128), Expect = 1e-23 Identities = 125/164 (76%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 203 TAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTA 262 |||||| ||||||||| |||||||| | | |||||||| || | ||| || || || Sbjct 39724642 TAAGTCTCGCAACGAGTGCAACCCTCGTGTTCAGTTGCCACTATGA-GTTTGGAACCCTG 39724584 Query 263 AGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCT 322 | ||| ||||||| || ||||||||||| | ||| || | || ||||||||||||| Sbjct 39724583 AACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAGGTCATCATGCCCCT 39724524 Query 323 TATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGG 366 |||| | ||| |||||||||||||||||| | ||||| || Sbjct 39724523 TATGCCCTAGGCGACACACGTGCTACAATGGGCGGGACAAAAGG 39724480 Score = 86.0 bits (94), Expect = 2e-14 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 330 TGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCA 389 ||||| |||||||||||||||||| | |||||||| |||| ||||||| ||| Sbjct 8280027 TGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCGAGGGTGAGCT 8280086 Query 390 AATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCG 434 || ||| ||| || |||||||||||||| || |||||||||| Sbjct 8280087 AACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCG 8280131 >seq4 Length=48772488 Score = 295 bits (326), Expect = 2e-77 Identities = 309/401 (77%), Gaps = 5/401 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGT-GGAGCA 59 |||| |||||| |||||||||||||||||||||||| ||| |||||||||| |||||| Sbjct 19631133 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCACACAAGCGGTTGGAGCA 19631074 Query 60 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCT 119 ||||||||||||| | |||| |||||||||||||||| |||||||| | || ||| Sbjct 19631073 TGTGGTTTAATTCAATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCACGAATCCT 19631014 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 || || | ||||| | |||| || || || |||| || ||||||| |||||||| Sbjct 19631013 CTTGAAAGAGAGGGGTGCCCTCAGGAACACGGAC--ACAG-TGGTGCATGGCTGTCGTCA 19630957 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 | ||||| ||| || |||||||||||||| |||||||||| ||||||| | ||||||| Sbjct 19630956 GTTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCACAACCCTCGTGTTTAGTTG 19630897 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 ||| | | |||| || || || | ||| |||||| || || |||||||| | ||| Sbjct 19630896 CCA-CTATGAGTTTGGAACCCTGAACAGACCACCGGTGTTAAGCCAGAGGAAGGAGAGGA 19630838 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 || | ||| ||||||||||||||||| |||||| |||||| ||||||||||| | Sbjct 19630837 TGAGGCCAAGTCATCATGCCCCTTATGCCTTGGGCGACACACATGCTACAATGGGTGGGA 19630778 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA 400 ||||||| |||| |||||| ||| || ||| ||| Sbjct 19630777 CAAAGGGTCGCGATCTTGCGAGGGTGAGCTAACTCCAAAAA 19630737 Score = 122 bits (134), Expect = 3e-25 Identities = 133/174 (76%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || |||||||||||||| |||||||| || |||| |||||||| Sbjct 15661211 GACTGCCAGTGAGATACTAGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 15661270 Query 327 ATTTGGGCTACACACGTGCTACAATG-----GACAAT-ACAAAGGGCAGCGAAACCGCGA 380 ||||| ||||||||||||||||| |||||| |||| ||| ||| | | | | Sbjct 15661271 GGCTGGGCCACACACGTGCTACAATGACAATGACAATGACAATGGGAAGCAAGGCTGTAA 15661330 Query 381 GGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCG 434 || ||| ||| ||| |||| | |||||||| |||||| ||||||||||| Sbjct 15661331 GGCGGAGCGAAT-CCAGAAAGATTGCCTCAGTTCAGATTGTTCTCTGCAACTCG 15661383 Score = 120 bits (132), Expect = 9e-25 Identities = 110/138 (80%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||| ||| || ||||||||||| || ||| || Sbjct 22892520 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAATCTCGCGAC 22892461 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 ||||||||| || | |||||||||| | | |||| || || || | ||| ||||| Sbjct 22892460 GAGCGCAACTCTCGTGTTTAGTTGCCA-CTATGAGTTTGGAACCCTGAACAGACCGCCGG 22892402 Query 276 TGACAAACCGGAGGAAGG 293 || || ||||||||||| Sbjct 22892401 TGTTAAGCCGGAGGAAGG 22892384 Score = 80.6 bits (88), Expect = 8e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 157 CAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACG 216 |||||| ||||||| ||||||||||||||| || || |||||||||||||| ||||||| Sbjct 7045646 CAGGTGGTGCATGGCTGTCGTCAGCTCGTGCTGTAAGGTGTTGGGTTAAGTCTCGCAACG 7045587 Query 217 AG 218 || Sbjct 7045586 AG 7045585 >seq2 Length=59384932 Score = 163 bits (180), Expect = 9e-38 Identities = 117/135 (87%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 44188442 CGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTT 44188383 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| |||| |||||||||||||||| |||||||| | || |||||||| | Sbjct 44188382 TAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTAGAAA 44188323 Query 127 TAGAGGTTTCCCCTT 141 ||||| ||||||| Sbjct 44188322 GAGAGGGGTCCCCTT 44188308 Score = 131 bits (144), Expect = 5e-28 Identities = 129/165 (78%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||| || |||||||||||||| |||||| Sbjct 13443150 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGG----TGTTGGGTTAAGTCTCGCAAC 13443095 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 |||||||||||| | |||||||||| | | |||| | || | | ||| ||||| Sbjct 13443094 GAGCGCAACCCTCGTGTTTAGTTGCCA-CTATGAGTTTGAAACCTTGAACAGACCGCCGG 13443036 Query 276 TGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCC 320 || || ||||||||||| | ||| || | ||| ||||||||||| Sbjct 13443035 TGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCC 13442991 >seq5 Length=28563423 Score = 102 bits (112), Expect = 2e-19 Identities = 87/105 (83%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 20632861 GACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 20632920 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGC 370 | ||| |||||||||||||||||| |||| |||| ||| ||| Sbjct 20632921 GGCTAGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGC 20632964 Score = 96.9 bits (106), Expect = 1e-17 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct 16189160 CGCAAGAACGAAACTCAAAGGAATTGATGAGGGCCCGCACAAGCGGTGGAGCATGTGGTT 16189219 Query 67 TAATTCGA 74 |||||||| Sbjct 16189220 TAATTCGA 16189227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503999578880