Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brachypodium_20distachyon_20[refseq_20GCF_5F000005505.2_202015-10- 29] 28 sequences; 272,132,505 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq28 199 1e-48 seq1 196 1e-47 seq3 188 2e-45 seq2 131 4e-28 seq5 129 1e-27 >seq28 Length=135199 Score = 199 bits (220), Expect = 1e-48 Identities = 306/421 (73%), Gaps = 19/421 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 95585 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 95529 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 95528 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 95473 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182 ||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| | Sbjct 95472 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 95415 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 95414 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 95355 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299 | ||||||||||||| || | |||||||| | ||||||||||| ||| || Sbjct 95354 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 95295 Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359 |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||| Sbjct 95294 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 95236 Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| | | |||||| | ||||| || || | ||||| || | |||||| Sbjct 95235 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 95176 Query 420 G 420 | Sbjct 95175 G 95175 Score = 199 bits (220), Expect = 1e-48 Identities = 306/421 (73%), Gaps = 19/421 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 119062 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 119118 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 119119 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 119174 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182 ||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| | Sbjct 119175 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 119232 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 119233 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 119292 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299 | ||||||||||||| || | |||||||| | ||||||||||| ||| || Sbjct 119293 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 119352 Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359 |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||| Sbjct 119353 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 119411 Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| | | |||||| | ||||| || || | ||||| || | |||||| Sbjct 119412 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 119471 Query 420 G 420 | Sbjct 119472 G 119472 >seq1 Length=75119905 Score = 196 bits (216), Expect = 1e-47 Identities = 305/421 (72%), Gaps = 19/421 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 35980185 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 35980129 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 35980128 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 35980073 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182 ||| | ||||||| ||||||||||| ||||||| |||| | ||| ||| | Sbjct 35980072 GACAAT-CGCCCTATGTAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 35980015 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 35980014 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 35979955 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299 | ||||||||||||| || | |||||||| | ||||||||||| ||| || Sbjct 35979954 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 35979895 Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359 |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||| Sbjct 35979894 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 35979836 Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| | | |||||| | ||||| || || | ||||| || | |||||| Sbjct 35979835 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 35979776 Query 420 G 420 | Sbjct 35979775 G 35979775 Score = 190 bits (210), Expect = 5e-46 Identities = 283/389 (73%), Gaps = 17/389 (4%) Strand=Plus/Plus Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100 ||||||||||| |||| ||||| | | |||| ||| || |||| ||| |||||||| Sbjct 3921960 AGTCGGTTCGGACCTCTGCTTAGTT-TCATCCAAGCTT-CATCCTGGTCAT-GGATAGAT 3922016 Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160 | ||| | || |||||| || | || ||| | ||||||| |||||||||||| ||| Sbjct 3922017 CACCCAGGTT-CGGGTCCATAAGC-AGTGACAAT-CGCCCTATGAAGACTCGCTTT-CGC 3922072 Query 161 TACGCCTCCCCTA--TTCGGTTA----AGCTTTGCCACTGAAAATAAGTCGCTGACCCAT 214 |||| |||| | ||| ||| | | ||||||| || |||||| | | ||| Sbjct 3922073 TACGGCTCCGGTGGGTTCCGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCAT 3922132 Query 215 TATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATA---C 271 | | ||| ||| |||| |||| | || | ||||||||||||| || | | Sbjct 3922133 TCTTCAACAGGCACGCGGTCAGAGATCACTTTCCCCTCCCACTGCTTGGGAGCTCAGCAC 3922192 Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 ||||||| | ||||||||||| ||| || |||||||||||| ||||||||||||||||| Sbjct 3922193 GGTTTCACGTTCTATTTCACTACCCACTG-GGGGTTCTTTTCACCTTTCCCTCACGGTAC 3922251 Query 332 TAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 391 || ||| |||||||||| ||| |||||||||||||| | | |||||| | ||||| Sbjct 3922252 TACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCAC 3922311 Query 392 ACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || || | ||||| || | ||||||| Sbjct 3922312 ACGGGATTCCACGTGCCCCATGCTACTCG 3922340 Score = 181 bits (200), Expect = 3e-43 Identities = 302/421 (72%), Gaps = 19/421 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 42075713 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 42075657 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 42075656 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 42075601 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182 ||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| | Sbjct 42075600 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 42075543 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | ||||||| || |||||| | | |||| | ||| ||| | || || | | || Sbjct 42075542 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCAGGCGGTTAGAGATCA 42075483 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299 | ||||||||||||| || | |||||||| ||||||||||| ||| || Sbjct 42075482 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACATTCTATTTCACTACCCACT 42075423 Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359 |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||| Sbjct 42075422 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 42075364 Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| | | |||||| | ||||| || || ||||| || | |||||| Sbjct 42075363 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCAACGTGCCCCATGCTACTC 42075304 Query 420 G 420 | Sbjct 42075303 G 42075303 Score = 150 bits (166), Expect = 4e-34 Identities = 176/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG 247 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || | Sbjct 55315920 GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTTC 55315861 Query 248 GGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 ||||||||||||| || | |||||||| | ||||||||||| ||| || ||| Sbjct 55315860 CCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG-GGG 55315802 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||||||| Sbjct 55315801 GTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGC 55315742 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 55315741 CTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 55315686 Score = 134 bits (148), Expect = 3e-29 Identities = 142/185 (77%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 198 ATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACT 257 || |||||| | | |||| | ||| ||| |||| |||| | || | ||| |||| Sbjct 46695590 ATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTTTCCCTCTCACT 46695531 Query 258 GCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 ||||| || | |||||||| | ||||||||||| ||| || |||||||||||| Sbjct 46695530 GCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG-GGGGTTCTTTTCA 46695472 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 ||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| | | | Sbjct 46695471 CCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGT 46695412 Query 375 GGTCC 379 ||||| Sbjct 46695411 GGTCC 46695407 Score = 129 bits (142), Expect = 1e-27 Identities = 115/143 (80%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 ||||||||||||||| ||| || |||||||||||| ||||||||||||||||||| ||| Sbjct 35897858 AGGATCTATTTCACTACCCACTG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTC 35897800 Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAG 397 |||||||||| ||| |||||||||||||| | | |||||| | ||||| || Sbjct 35897799 GCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGA 35897740 Query 398 TTTCTCGTGCTCCGTCCTACTCG 420 || | ||||| || | ||||||| Sbjct 35897739 TTCCACGTGCCCCATGCTACTCG 35897717 >seq3 Length=59935730 Score = 188 bits (208), Expect = 2e-45 Identities = 279/381 (73%), Gaps = 21/381 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| || || | || |||||| ||||||||||| |||| ||||| | Sbjct 26504211 CCACAACTCATCCC-CTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 26504155 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 26504154 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 26504099 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA-------TTCGGTTA 181 ||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| Sbjct 26504098 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTCCCTTA 26504041 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 26504040 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 26503982 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||||||||||||| || | |||||||| | ||||||||||| ||| | Sbjct 26503981 ACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCAC 26503922 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 26503921 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 26503863 Query 359 TTTAGCCTTGGAGGATGGTCC 379 |||||||||| | | |||||| Sbjct 26503862 TTTAGCCTTGCAAGGTGGTCC 26503842 Score = 127 bits (140), Expect = 5e-27 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG 247 ||||||| || |||||| | | |||| | ||| ||| ||| |||| | || | Sbjct 3268393 GCCACTGCCGATGAGTCGCCGGCTCATTCTTCAACAGGCACGTGGTCAGAGATCACTTTT 3268452 Query 248 GGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 |||||| |||||| || | |||||||| | ||||||||||| ||| || ||| Sbjct 3268453 TCCTCCCATTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG-GGG 3268511 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| || ||||||||||||||| ||| |||||||||| ||| |||||||||| Sbjct 3268512 GTTCTTTTCACCAGTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGC 3268571 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||| | | |||||| | ||||| || || | |||| || | ||||||| Sbjct 3268572 CTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCATGTGCCCCATGCTACTCG 3268627 Score = 73.4 bits (80), Expect = 1e-10 Identities = 120/161 (75%), Gaps = 9/161 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 28302172 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 28302116 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | | Sbjct 28302115 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGCAAT- 28302060 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC 169 ||| | ||||||| ||||||||| |||||||||| |||| Sbjct 28302059 GACAAT-CGCCCTATGAAGACTCGC-TTTCGCTACGGCTCC 28302021 >seq2 Length=59384932 Score = 131 bits (144), Expect = 4e-28 Identities = 254/358 (71%), Gaps = 18/358 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||| | | || |||||| ||||||| || |||| ||||| || Sbjct 57941490 CCACAACTCAT-CCGTTGA-TTCTTCAACATCGGTCGGTTTGGACCTCTGCTTAGTT-TT 57941546 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||||| ||| ||| ||||||||| ||| | ||| ||||| || | || Sbjct 57941547 ATCCAAG-TTTCATCCTTGTCAT-GGATAGATCACCCAGGTTT-GGGTCCATAAGC-AGT 57941602 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA---AG 183 ||| | ||||||| |||||||| ||| ||||||| ||| | ||| ||| | Sbjct 57941603 GACAAT-CGCCCTATGAAGACTCGATTT-CGCTACGGCTCTGATGGGTTCCGTTCCTTAA 57941660 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 | ||||||| || ||||| | | |||| | ||| ||| | || |||| | | Sbjct 57941661 CCAAGCCACTGCTTATGAGTCGTCGGCTCATTCTTCAACAGGCATGCGGTCAGAGATAAC 57941720 Query 244 AGTGGGCTCCCACTGCTTGTACG--CAT-ACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 | ||||||||||||| | || ||||||||| | ||||||||||| ||| || Sbjct 57941721 TTTCCCCTCCCACTGCTTGGGAGTTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG 57941780 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 |||||||||||| |||||||||| |||||||| ||| |||||||||| ||| |||| Sbjct 57941781 -GGGGTTCTTTTCACCTTTCCCTCTCGGTACTATTTCGCTATCGGTCACCCAGGAGTA 57941837 >seq5 Length=28563423 Score = 129 bits (142), Expect = 1e-27 Identities = 134/174 (77%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 250 CTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || | |||||||| | ||||||||||| ||| || ||||| Sbjct 25758519 CTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG-GGGGT 25758577 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| || |||| ||||| ||| |||||||||||| Sbjct 25758578 TCTTTTCACCTTTCCCTCACGGTACTACTTTGCTATTGGTCACCCAGGAGTATTTAGCCT 25758637 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 25758638 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 25758691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241599652352