Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq13518 89.7 2e-16 seq7535 77.0 1e-12 seq12131 71.6 6e-11 seq12066 71.6 6e-11 seq5 71.6 6e-11 seq4 71.6 6e-11 >seq13518 Length=2163 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1991 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 2049 >seq7535 Length=1467 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||| |||| |||| |||||| Sbjct 732 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATAAGCCCA 788 >seq12131 Length=26016 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 16909 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 16851 >seq12066 Length=664773 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 27047 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 27105 >seq5 Length=158699395 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 1571527 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 1571469 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 1582770 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 1582712 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 10478526 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 10478584 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 48875948 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 48876006 >seq4 Length=191835039 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 184572245 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 184572303 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 190807827 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 190807769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230355959760