Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cenchrus_20americanus_20[genbank_20GCA_5F002174835.1_202017-06-07] 20,389 sequences; 1,794,547,441 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq12525 518 8e-145 seq15820 203 8e-50 seq13312 203 8e-50 seq3 203 8e-50 seq2 203 8e-50 seq410 156 1e-35 seq5 127 5e-27 seq1 123 6e-26 seq7579 96.9 9e-18 >seq12525 Length=4139 Score = 518 bits (574), Expect = 8e-145 Identities = 373/417 (89%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| ||||| || || ||||| ||||| ||| ||||||||||||||||||| Sbjct 2207 CCTATCCACAAGTCATCCC-CTGGCTTTT-CAACGACAGTGGGTTCGGTCCTCCAGTTAG 2264 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||||||||| |||||||| ||| |||||||||||| ||||| ||||||||| | Sbjct 2265 T-GTTACCCAACCTT-CAACCTGCTCAT-GGATAGATCGCCTGGTTT-CGGGTCTATA-C 2319 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| |||| |||||||| ||||||||| ||| | ||||| ||||||||||||||||| Sbjct 2320 CCAGCAACTAAACGCCCTATTAAGACTCGATTT-CTCTACGGCTCCCCTATTCGGTTAAC 2378 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || || |||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2379 CTC-GCTACTGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCGAACAA 2437 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || ||||||||||||||||| |||| |||||||||||||||||||||||||||| | || Sbjct 2438 -GTCGGCTCCCACTGCTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCACAGG 2496 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 2497 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAG 2556 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| Sbjct 2557 CCTTGGAGGATGGTCCCCCCATATTCAGACAAGGTTTCACGTGCCTCGCCCTACTCG 2613 >seq15820 Length=79755 Score = 203 bits (224), Expect = 8e-50 Identities = 307/422 (73%), Gaps = 21/422 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 62277 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 62333 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 62334 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 62389 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | ||||||| |||||||||||| ||||||| |||| | |||| ||| Sbjct 62390 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCATTCCCTTA 62447 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 62448 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 62506 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||||||||||||| || | |||||||| | ||||||||||| ||| | Sbjct 62507 ACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCAC 62566 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 62567 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 62625 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 62626 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 62685 Query 419 CG 420 || Sbjct 62686 CG 62687 >seq13312 Length=299805 Score = 203 bits (224), Expect = 8e-50 Identities = 307/422 (73%), Gaps = 21/422 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 205671 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 205615 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 205614 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 205559 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | ||||||| |||||||||||| ||||||| |||| | |||| ||| Sbjct 205558 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCATTCCCTTA 205501 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 205500 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 205442 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||||||||||||| || | |||||||| | ||||||||||| ||| | Sbjct 205441 ACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCAC 205382 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 205381 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 205323 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 205322 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 205263 Query 419 CG 420 || Sbjct 205262 CG 205261 >seq3 Length=300915289 Score = 203 bits (224), Expect = 8e-50 Identities = 307/422 (73%), Gaps = 21/422 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 58657153 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 58657209 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 58657210 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 58657265 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | ||||||| |||||||||||| ||||||| |||| | |||| ||| Sbjct 58657266 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCATTCCCTTA 58657323 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 58657324 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 58657382 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||||||||||||| || | |||||||| | ||||||||||| ||| | Sbjct 58657383 ACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCAC 58657442 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 58657443 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 58657501 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 58657502 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 58657561 Query 419 CG 420 || Sbjct 58657562 CG 58657563 Score = 127 bits (140), Expect = 5e-27 Identities = 265/380 (70%), Gaps = 21/380 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| || |||| || |||||| ||||||| | | |||| ||||| | Sbjct 254382615 CCACAACTCAT-CCACTAA-TTCTTCAACATCAGTCGGTACAGACCTCTGCTTAGTT-TC 254382559 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| || | ||| ||||| || || Sbjct 254382558 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCTAGGTTT-GGGTCCATAAGT-AGT 254382503 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | | ||||| || |||| ||||| |||| | ||| | |||| ||| Sbjct 254382502 GACAAT-CACCCTATGAAAACTCACTTTT-GCTATGACTCTGGTGGGTTCCATTCCCTTA 254382445 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||| |||| |||| | ||| ||| ||| |||| | | Sbjct 254382444 ACCAA-GCCACTGCCTATGAGTCATTGACTCATTCTTCAATAGGCACGTGGTCAGAGATC 254382386 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | |||||||| |||| || | |||||||| | ||||||||||| ||| Sbjct 254382385 ACTTTCCCCTCCCACTACTTGGGAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCAT 254382326 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||| ||| ||| |||||||||| | | |||| Sbjct 254382325 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTGCTACTTCGCTATCGGTCACCCTGGAGTA 254382267 Query 359 TTTAGCCTTGGAGGATGGTC 378 |||||| ||| | | ||||| Sbjct 254382266 TTTAGCATTGCAAGGTGGTC 254382247 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | ||||||||||| Sbjct 136554408 ACTGATTGTTCGCATCAGATCTCAGGTTCTCTATTGCACTCCCTGATT-GGGGTTCTTTT 136554350 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 136554349 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 136554290 Query 373 ATGGTCCCCC 382 |||||| || Sbjct 136554289 GTGGTCCTCC 136554280 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 136609783 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 136609841 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||| |||| || | |||||||||| | || | || |||| ||| |||| Sbjct 136609842 CACCTTTCCCTCACAATACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 136609901 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 136609902 GTGGTCCCCC 136609911 >seq2 Length=243061704 Score = 203 bits (224), Expect = 8e-50 Identities = 307/422 (73%), Gaps = 21/422 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| | Sbjct 34153308 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 34153364 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 34153365 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 34153420 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | ||||||| |||||||||||| ||||||| |||| | |||| ||| Sbjct 34153421 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCATTCCCTTA 34153478 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 34153479 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 34153537 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||||||||||||| || | |||||||| | ||||||||||| ||| | Sbjct 34153538 ACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCAC 34153597 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 | |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct 34153598 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 34153656 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 34153657 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 34153716 Query 419 CG 420 || Sbjct 34153717 CG 34153718 Score = 111 bits (122), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 33114195 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 33114253 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 33114254 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 33114313 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 33114314 GTGGTCCCCC 33114323 Score = 111 bits (122), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 33124873 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 33124931 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 33124932 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 33124991 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 33124992 GTGGTCCCCC 33125001 Score = 107 bits (118), Expect = 5e-21 Identities = 103/130 (79%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 224075996 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 224076054 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || ||| ||| |||| Sbjct 224076055 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACATAGGCTTAGAGG 224076114 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 224076115 GTGGTCCCCC 224076124 Score = 73.4 bits (80), Expect = 1e-10 Identities = 66/81 (81%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 250 CTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| | || | |||||||| | ||||||||||| ||| || ||||| Sbjct 93654379 CTCCCACTGCTTGGAAGCTCAGCACGGTTTCATGTTCTATTTCACTACCCACTG-GGGGT 93654437 Query 307 TCTTTTCGCCTTTCCCTCACG 327 ||||| | ||||||||||||| Sbjct 93654438 TCTTTCCACCTTTCCCTCACG 93654458 >seq410 Length=1208 Score = 156 bits (172), Expect = 1e-35 Identities = 180/239 (75%), Gaps = 9/239 (4%) Strand=Plus/Minus Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAAA 244 ||||||| || |||||| | | |||| | ||| ||| |||| || | ||| | Sbjct 1196 GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTTAGAGCCC--CGGG 1139 Query 245 GTGGGCTCC---CACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 |||||||| ||||||||| || |||||||||| | ||||||||||||||| | Sbjct 1138 CTGGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG- 1080 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||||||||||| || |||||||||||||||| |||||||||||||| ||| ||||||| Sbjct 1079 GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTT 1020 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||| | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 1019 AGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 961 >seq5 Length=158699395 Score = 127 bits (140), Expect = 5e-27 Identities = 291/422 (69%), Gaps = 22/422 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| | ||| | || |||||| |||||||||| |||| | ||||| | Sbjct 105681211 CCACAACTCAT-CTGCTGA-TTCTTCAACACCGGTCGGTTCGGACCTCTACTTAGTT-TC 105681155 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | |||| ||| || ||| ||| ||||||||| || | ||| ||||| || | Sbjct 105681154 ATCCAAGCTT-CATCCTAATCAT-GGATAGATCACCTAGGTTT-GGGTCCATAAGAAAT- 105681099 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181 ||| | ||||||| ||||||| |||| ||||||| ||| | |||| ||| Sbjct 105681098 GACAAT-CGCCCTATGAAGACTCTCTTT-CGCTACGGCTCTGGTGGGTTCCATTCCCTTA 105681041 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || ||| ||| |||| | ||| ||| |||| || | | | Sbjct 105681040 ACCAA-GCCACTGCCCATGAGTGATCGACTCATTCTTCAACAGGCACGCGGTAAGAGATC 105680982 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298 | | ||| |||| ||| || | |||||||| | ||||||| ||| ||| | Sbjct 105680981 ACTTTCCCCTCTCACTTATTGGGAGCTCAGCACGGTTTCACGTTCTATTTTACTACCCAC 105680922 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 || |||||||||||| | ||| ||||||||||||| ||| ||||| |||| ||| |||| Sbjct 105680921 TC-GGGGTTCTTTTCAC-TTTACCTCACGGTACTACTTCGCTATCAGTCACCCAGGAGTA 105680864 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 105680863 TTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 105680804 Query 419 CG 420 || Sbjct 105680803 CG 105680802 >seq1 Length=275477322 Score = 123 bits (136), Expect = 6e-26 Identities = 131/171 (77%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 212 CATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATA- 270 |||| | ||| ||| |||| |||| | || | ||||||||||||| || | Sbjct 58089350 CATTCTTCAACAGGCACGCGGTCAGAGATCACTTTTCCCTCCCACTGCTTGGGAGCTCAG 58089291 Query 271 --CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 | |||||| | ||||||||||| ||| || |||||||||||| |||||||||||||| Sbjct 58089290 CACCGTTTCATGTTCTATTTCACTACCCACTG-GGGGTTCTTTTCACCTTTCCCTCACGG 58089232 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||| ||| |||||| ||| ||| |||||||||||||| | | |||||| Sbjct 58089231 TACTACTTCGCTATCGATCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 58089181 Score = 111 bits (122), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 161347590 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 161347648 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 161347649 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 161347708 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 161347709 GTGGTCCCCC 161347718 >seq7579 Length=2211 Score = 96.9 bits (106), Expect = 9e-18 Identities = 166/227 (73%), Gaps = 12/227 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 221 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 165 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| |||| |||||||| ||| | |||||||| | | ||| Sbjct 164 ACCCAAGC-TTCATCCTGGTCATA-GATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 109 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 108 GAC-AATTGCCCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGTTTCCCTTAA-CCA 52 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGT 233 ||||||| || |||||| | | |||| | ||| ||| |||| || Sbjct 51 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241346850176