Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10464 289 4e-76 >seq10464 Length=52742 Score = 289 bits (320), Expect = 4e-76 Identities = 214/246 (87%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||| |||| ||| ||| | ||| |||||| ||||||||| ||| | Sbjct 37646 GTACAAAGGGTAGGGACATAGTAAACATGAGGT-GATTACTCGCACTTACTAGGCATT-C 37589 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 37588 CTCATTGAAGACCAACAATTGCAATGATCTATCCCCATCTAGATGAAATTTCCCAAGATT 37529 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||| |||||||| ||| ||| ||| |||||||||| ||||||| |||||| Sbjct 37528 ACCCGGGTCTGTTGGCCAAGGCTATATACTTGTTAAATACATCAGCGTAGCGCACGTGCG 37469 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||| Sbjct 37468 GCCCAGAACATCTAATGGCATCATAGACCTATTATTGCCTCAAACTTCCCTGGCCTAAAC 37409 Query 240 GGCCAT 245 ||||| Sbjct 37408 AGCCAT 37403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751872978740