Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10464 203 6e-50 >seq10464 Length=52742 Score = 203 bits (224), Expect = 6e-50 Identities = 196/248 (79%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| ||| ||||| | |||||||||||| Sbjct 34887 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATTGCTATGGATACATTAGCAT 34946 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | ||| ||||| |||||| | |||| | | |||||| Sbjct 34947 GGGATAACATCATAGGATTTT-GGTCCTATTGTGTTGGCCTTCAGGATCAGAGCAATGAT 35005 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 |||||| || |||| ||| | ||||| || || |||||||||| || ||||||||| Sbjct 35006 TAATAGAGACAGTCAAGGGCATTCGTATTTCATAGTTAGAGGTGAAAGTCATGGATTTAT 35065 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| |||| |||||| || |||||||||||||||||||||| |||||||| Sbjct 35066 GAAAGACGAACAACTGTGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 35124 Query 311 GTTAGGGG 318 ||| |||| Sbjct 35125 GTTGGGGG 35132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915040425728