Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq10464 342 9e-92 >seq10464 Length=52742 Score = 342 bits (378), Expect = 9e-92 Identities = 242/276 (88%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 |||||| || ||| || ||||||| | ||||||||||||||| ||||| || |||||| Sbjct 31747 AATTACTATCACGGC-ACAGTCATCAATTGGGTAAAACTAACCTATCTCACGATGGTCTA 31689 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||| |||| |||||||||| ||||||||||||||||| |||| ||||||| |||| Sbjct 31688 AACCCAACTCATGTTCCCTATTGGTGGGTGAACAATCCAATGCTTGGTGAATTCTACTTC 31629 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 31628 ACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACATCGCTATGGACGCTTGG 31569 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 |||||||||||||| ||||| |||||||||||||||| |||||||| | ||||| || || Sbjct 31568 CTGCCACAAGCCAGATATCCATGTGGTAACTTTTCTGACACCTCTACCTTCAAACTTTGA 31509 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286 || |||||||||||||||||||| ||||||||||| Sbjct 31508 AGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTT 31473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854251026816