Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq568 167 5e-39 seq14134 96.9 7e-18 >seq568 Length=9593 Score = 167 bits (184), Expect = 5e-39 Identities = 214/293 (73%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| | || || ||||| |||||||||| ||||| |||||||||| Sbjct 4295 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCGGTAGGGGTCTGGGCCG 4236 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 |||||| ||||| |||||| | ||| |||||||| || |||| |||| ||| |||||| Sbjct 4235 TGTCTCGGTCCCGGTGTGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGTCTTGGT 4176 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAG-CCCATCTTTCAGCGATAAATCT 191 |||||| ||||||||||| |||||| | ||||| |||| ||| ||| || Sbjct 4175 AAGCTATTGCCTCACCAACTAGCTAATCAGATGCGAGTCCCACCTTAGGCGGATTTCTCC 4116 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || ||| ||||| | | || | |||||||| ||||||| | Sbjct 4115 TT------------TTGC--TCCTCAGCC--TACGAGGTATTAGAAACCGTTTCCCGTTG 4072 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| ||| || || ||||| || ||||||||||||||| | ||||||| Sbjct 4071 TTGTTCCCCTCCCAAGGGTAGGTT-CTTACGTGTTACTCACCCATTCGCCACT 4020 >seq14134 Length=25678 Score = 96.9 bits (106), Expect = 7e-18 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 || |||| |||||||| ||| || ||||||||||||| ||||| ||||| ||||||||| Sbjct 21496 GGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTTCGGGCCGTGT 21437 Query 76 CTCAGTCCCAATGTGGCCGTTCA 98 |||||||||| |||||| | ||| Sbjct 21436 CTCAGTCCCAGTGTGGCTGATCA 21414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998225918976