Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8389 96.9 3e-15 >seq8389 Length=83750 Score = 96.9 bits (106), Expect = 3e-15 Identities = 235/354 (66%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 ||||| ||||||| || ||||||||||||| |||||||| || | ||| ||| Sbjct 79963 TACAAGAAGGCGGTGGCGTCCTTCTGGACGGCCGAGGAGGTGGACCTCTCCGGCGACGCC 80022 Query 61159 AATGACTGGGA-GCGTT--TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 ||||||| | | | | || || || | || ||| | || ||| | || Sbjct 80023 CGACACTGGGACGAGGTGCTCTCCCCCGACGAGCGCCACTTCGTCTCCCACGTGCTCGCC 80082 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| ||||| || ||||| ||||| ||||| | || ||| | || Sbjct 80083 TTCTTCGCCGCCTCCGACGGCATCGTGCTCGAGAACCTGGCCTCCCGCTTCATGTCCGAC 80142 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||||| || | ||||| || ||||||||||||||||| ||||| ||||| ||||| Sbjct 80143 GTGCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCAC 80202 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA 61395 |||||||||||| | || |||| || |||||| | || | || || || || Sbjct 80203 TCGGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGGCGCCGAGAAGGACCGC 80262 Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCC 61449 ||||| |||||||| || | || || || ||| || || || |||||| Sbjct 80263 CTGTTCCGCGCCATCGACACTGTCCCCGCCGTCCGGCGCAAGGCCGACTGGGCC 80316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397483516303040