Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dichanthelium_20oligosanthes_20[genbank_20GCA_5F001633215.2_202016- 09-29] 17,436 sequences; 589,166,415 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6240 93.3 2e-13 >seq6240 Length=92588 Score = 93.3 bits (102), Expect = 2e-13 Identities = 169/248 (68%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTGC 21692 || || ||||| || | ||||||||||||||| ||| || |||| || || | | Sbjct 15946 ACGCCGGTGGATCCGAACCCTCCCTCGCCGCGCACGGTGGCGTCGAGGTCCTCCACCTCC 15887 Query 21693 GCCTGCTGCAAAACTGGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCA 21752 || || | || |||| ||| || | ||| | || ||||| || ||||| Sbjct 15886 GCGACCTCC------GGCGTCGCGATCACCTCGATGATCATCTGCGCGATCCGGTCGCCG 15833 Query 21753 TGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTA 21812 |||| | | | |||||| ||| |||||||||||||| | ||||||||| ||| | Sbjct 15832 GGCTTCACTGCGAAGTCCGCGTCCGAGTGGTTGAAGAGGATGACCCCGACCGGGCCGCGG 15773 Query 21813 TAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGAT 21872 ||| ||||| || || ||||| ||||||| || |||||| ||||| ||||| Sbjct 15772 TAATCGGCGTCGATCACGCCCGCGCCCACGTCGATGGAGTGCTTCAACGCCAGCCCCGAC 15713 Query 21873 CTGGGAGC 21880 || || || Sbjct 15712 CTCGGCGC 15705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084262112645928