Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dioscorea_20rotundata_20[genbank_20GCA_5F002240015.1_202017-07-28]
21 sequences; 456,674,974 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq9 82.4 7e-14
seq8 82.4 7e-14
seq3 80.6 3e-13
>seq9
Length=23324680
Score = 82.4 bits (90), Expect = 7e-14
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
||||||| | |||||||| |||||||||||||| ||||||| || | || || ||
Sbjct 6167717 ACCAGGCAGTAGCGACTGTCTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGT 6167658
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||| || |||| |||||||| ||| |||||||
Sbjct 6167657 ATAGAGTCTGACACCTGCCCGTTGCTGGAAGGT 6167625
>seq8
Length=28021425
Score = 82.4 bits (90), Expect = 7e-14
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 48 GTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAA 107
|||| || |||||||| ||||||||||| |||||||||| ||| ||||| || |
Sbjct 39802 GTCGCAGTGACCAGGCCTAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTA 39861
Query 108 AGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| | |||| ||| |||||| ||||| |||||||||||| ||
Sbjct 39862 AGACCATGTATGGGGGCTGACGCGTGCCCAGTGCCGGAAGGTCAA 39906
>seq3
Length=19547260
Score = 80.6 bits (88), Expect = 3e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||||| || | || || |||||| || |||
Sbjct 8012508 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGA 8012449
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| ||| |||||||| |||||||
Sbjct 8012448 CACCTACCCGGTGCTGGAAGGT 8012427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476799903001
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |