Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioscorea_20rotundata_20[genbank_20GCA_5F002240015.1_202017-07-28] 21 sequences; 456,674,974 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 2e-18 seq6 82.4 1e-13 >seq8 Length=28021425 Score = 98.7 bits (108), Expect = 2e-18 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||| | || |||| | ||||||| | ||| || ||| || |||| Sbjct 21123415 GTATGAGAGGAACAGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 21123472 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | |||||||||| ||| ||| |||||||||||||||||||||||| ||||||||| || Sbjct 21123473 GGCGCGAAGCTATCATGTGCCGGATTATGGCTGAACGCCTCTAAGCCAGAATCCAAGC 21123530 >seq6 Length=32866201 Score = 82.4 bits (90), Expect = 1e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||| | | ||| |||||||||||||||||||||||| ||||||| Sbjct 3336355 AGCCAGTGGCGCGAAGCTATCGTGTGCCGGATTATGGCTGAACGCCTCTAAGCCAGAATC 3336296 Query 114 CATGCCAG 121 || || || Sbjct 3336295 CAAGCTAG 3336288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199833344