Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq297 230 6e-58 seq247 201 3e-49 seq9539 141 2e-31 seq14803 132 1e-28 seq2182 131 4e-28 seq14352 118 3e-24 seq1657 114 3e-23 seq248 87.8 5e-15 >seq297 Length=119073 Score = 230 bits (254), Expect = 6e-58 Identities = 299/410 (73%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 70143 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 70202 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTG 121 |||||||| |||||| | |||||||||||||| | ||| || |||| ||| | | | Sbjct 70203 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTGT-CAAGTCCGCCG 70261 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 70262 TCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAG 70321 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| | Sbjct 70322 GGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACG 70381 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| ||| | ||||| |||||||| || | |||||||| |||||||||| Sbjct 70382 GCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATG 70441 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 ||||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 70442 GGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCG 70501 Query 362 TTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 70502 ACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 70551 >seq247 Length=183695 Score = 201 bits (222), Expect = 3e-49 Identities = 247/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| ||||| |||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 58797 GAGGAAGAAGCCCCGGCAAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 58738 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 58737 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 58681 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 58680 AAGTCGC---CAAAAACTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 58624 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| || |||| | | |||||| |||| || Sbjct 58623 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTACGAAGGAACGCCAAAAGC 58564 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | | ||||||| |||||||| |||||| Sbjct 58563 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGAGGTGCGAAAGCATGGGGAGCGAACAGG 58504 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 58503 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 58470 >seq9539 Length=18414 Score = 141 bits (156), Expect = 2e-31 Identities = 134/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||| ||||| | |||||| | ||| |||| | |||||| ||||||| || |||| | Sbjct 512 ACTTGAGTGAGACAGAGGAGAGTGAAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTAC 571 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | |||||| |||| ||||||| ||| | ||||| || |||||| | | |||||| Sbjct 572 GAAGGAACGCCAAAAGCGAAGGTAGCTCTCTGGGTCCCTACCGACGCTGAGGAGCGAAAG 631 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | |||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct 632 CATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 682 >seq14803 Length=11039 Score = 132 bits (146), Expect = 1e-28 Identities = 280/412 (68%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| |||| |||| ||||||||| | ||| ||| Sbjct 580 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCTAGCAACCGCGGTAAGATAGAGGATGC 639 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCG-GTTGTGTAAGACAGGTG 121 |||||||| |||||||| |||||||||| ||| ||| | |||| | | | | Sbjct 640 AAGCGTTATCCGGAATTATTGGGCGTAAAACGTCTCTAGGTGTCTTGT-CATGTCCGCCA 698 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | ||||| | ||||| |||| ||| ||| | | | | | || |||| | | Sbjct 699 TCAAATCTCAGGGCTCAACCCTGGACATGCGGTGGAAAGTACCAAGCTGGAGTACGATTG 758 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||| | ||| ||| || |||||| |||| || | | ||||||||| Sbjct 759 GGGCAGAGGGAATTTCTGGTGGAGCGGTAAAATGCATAGAGATCGGAAAGAACACCAACC 818 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 | || ||| |||| |||||||| || | |||||||| |||||| ||| Sbjct 819 ACAAAAGCACTATGGTGGGTCGACACTGACACTGAGAGACGAAAGCTAGGGGAGAAAATG 878 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG--GGGATTT 359 |||||||||| || ||||||| || |||||||| ||||| | || | || Sbjct 879 GGATTAGATATCCCAGTAGTCCTGGCAGTAAACGATTGATACTAGGCGATGTACGTATCG 938 Query 360 ACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || || |||||||||| || || | ||||||||||| ||| Sbjct 939 AC--CCGTGCAGTGTTGTAGCTAACGTGTTAAATATCCCGCCTGGGGAGTAC 988 Score = 96.9 bits (106), Expect = 9e-18 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||| ||||||| |||||| || ||| ||| Sbjct 6824 TATCTGAGGAATAAGCATCGGCTAACTCTATGCTAGCAGCCACGGTAAGACAGAGGATGC 6883 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTG 121 |||||||| |||||| |||||||||||||| | || || |||| ||| | | | Sbjct 6884 AAGCGTTATCCGGAATGTTTGGGCGTAAAGCGTCTGTAGTTGGCTTGT-CAAGTCTGTCG 6942 Query 122 TGAAATCCCCGGGCTTAACC 141 | ||||||| | ||| |||| Sbjct 6943 TTAAATCCCAGAGCTCAACC 6962 >seq2182 Length=78787 Score = 131 bits (144), Expect = 4e-28 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 171 GAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAG 230 ||||| | |||||| | ||| |||| | |||||| ||||||| || |||| | || || Sbjct 27673 GAGTGAGACAGAGGAGAGTGCAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTATGAAG 27732 Query 231 GAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTG 290 |||| |||| ||||||||||| | ||||| || || ||| | | ||||||| || Sbjct 27733 GAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGATGCTGAGGTGCGAAAGCATG 27792 Query 291 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| |||| |||||||||||||||||||||| | | |||||||| Sbjct 27793 GGGAGAGAACAAGATTAGATACCCTGGTAGTCCATGTCGTAAACGAT 27839 >seq14352 Length=11509 Score = 118 bits (130), Expect = 3e-24 Identities = 235/340 (69%), Gaps = 10/340 (3%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || || | ||||||||| | ||||||| ||||||||||||||||||| | ||| ||| Sbjct 2253 TATCTAAGGAATAAGCATCAGCTAACTCTGTGCCAGCAGCCGCGGTAAGATAGAGGATGC 2312 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTG 121 |||||| | | |||| | |||||||||||| | | ||| || |||| ||| | | | Sbjct 2313 AAGCGTAATCCAGAATGATTGGGCGTAAAGCATCTGTAGGTGGCTTGT-CAAGTCCGCCG 2371 Query 122 TGAAATCCCCGGGCTTAACCTG-GGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180 | ||||||| ||||| |||| | ||| || | ||| | || |||| || Sbjct 2372 TCAAATCCCAGGGCTCAACCCGTGGATAGGCGGTGAAAACTACCAAGCTGGAGT---ACA 2428 Query 181 G-AGGGG--GGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACC 237 | ||||| | |||||| ||| ||| ||||||| | |||| || | ||||||| Sbjct 2429 GTAGGGGCAGAGGGAATTTTTGGTGGAGCGGTGAAAT-CCTAGAGATAAAAAAGAACACC 2487 Query 238 AATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCA 297 |||| | || ||| | |||| ||||| || || | | ||| || | |||||| Sbjct 2488 AATGACAAAAGCACTCTGTTGGGTCGACACTAACACTGAGAGATGAACGCTAGTGGAGCA 2547 Query 298 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 || ||||| |||||| ||||||| || |||||||| Sbjct 2548 AATGAGATTACATACCCCAGTAGTCCTAACCGTAAACGAT 2587 >seq1657 Length=52216 Score = 114 bits (126), Expect = 3e-23 Identities = 187/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 33 TGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAG 92 |||||||||||||||||| || ||| |||||| |||| |||||| | ||||||||||| Sbjct 19281 TGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGAGTTATCCGGAATGATTGGGCGTAAAG 19340 Query 93 CGTGCGCAGGCGG-TTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGC 151 ||| | ||| || |||| ||| | | || |||||| ||| | |||| ||| || Sbjct 19341 CGTCTGTAGGTGGCTTGT-CAAGTCCGCCGTCAAATCCTAGGGATCAACCCTGGACAGGC 19399 Query 152 ATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGA 211 | | ||| | || |||| | || || |||||| | || ||| |||| Sbjct 19400 GGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAAAGGGAATTTCCGATGGAGCGGTGA 19459 Query 212 AATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGAC 271 |||||||||| || | | ||||||||| | |||| ||| | ||||| |||||||| Sbjct 19460 AATGCGTAGAGATCGGAAAGAACACCAACGACGAAAGCACTCTACTGGGCCGACACTGAC 19519 Query 272 GCTCATGCACGAAAGCGTGGGGAGCAA 298 || | |||||||| | ||||||| Sbjct 19520 ACTGAGAGACGAAAGCTAGTGGAGCAA 19546 >seq248 Length=99003 Score = 87.8 bits (96), Expect = 5e-15 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||| ||| |||||||| ||||| | | | ||||||||| | |||| ||| | |||| Sbjct 70941 GTGGAGCGGTGAAATGTGTAGAGACCGGAAAGAACACCAACGTCGAAAGCACTCTGCTGG 71000 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 | ||||| || || | |||||||| |||||||||| ||||||||||||| || Sbjct 71001 GCCGACACTAACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGATACCCCAATA 71060 Query 320 GTCCACGCCCTAAACGAT 337 ||| ||| |||||||| Sbjct 71061 ATCCTAGCCATAAACGAT 71078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289080471744