Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq297 273 5e-71 seq2 237 4e-60 seq16668 150 5e-34 seq15061 147 6e-33 seq5036 138 3e-30 seq19325 131 4e-28 seq2312 120 8e-25 seq2783 116 9e-24 seq18140 100 7e-19 seq5017 86.0 2e-14 seq17591 82.4 2e-13 seq9626 80.6 7e-13 >seq297 Length=119073 Score = 273 bits (302), Expect = 5e-71 Identities = 309/418 (74%), Gaps = 27/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 75666 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 75607 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75606 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 75547 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||||| | | || | ||| Sbjct 75546 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCA 75487 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 75486 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 75427 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 75426 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 75373 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 75372 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 75330 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 75329 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 75272 >seq2 Length=225651 Score = 237 bits (262), Expect = 4e-60 Identities = 300/413 (73%), Gaps = 22/413 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 50397 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 50338 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 50337 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 50278 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||| ||| | || Sbjct 50277 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC------TTATCACAC 50224 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || || | | Sbjct 50223 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 50164 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 50163 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 50104 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 50103 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 50059 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC-AAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | |||||||| | ||||| | |||| |||||| Sbjct 50058 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTAC 50006 >seq16668 Length=9150 Score = 150 bits (166), Expect = 5e-34 Identities = 251/363 (69%), Gaps = 26/363 (7%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 || ||| ||| |||||| |||| ||||||| | | ||||||||| | ||||||||||| Sbjct 839 TCATTATGCCTTTCGTGTGGGTCAAAACTTACTCAATAAGGAATTTTGATACCTTAGGAC 898 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCT 183 |||||| |||| |||||||||| || |||||||| || | || | | | || | Sbjct 899 CGTTATAGTTAGGGCCGCCGTTCACTAGGGCTTCGGTCGCGGACTCCCCTATCATCAGGT 958 Query 184 AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 ||| | || |||||| | ||| ||||| |||||| ||| |||| | ||| || Sbjct 959 CACCAACTTCCTTGACCTTCTGACACTGGGCAAGCGTCAACCCCCATACATGGTCTTACG 1018 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGC 303 ||||| ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 1019 ACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTACGACC--- 1075 Query 304 ATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363 ||| ||| ||| ||||| ||||||||||||||||| | | Sbjct 1076 ---CCCTTTGTGAG-AAG----GCACCC-----------CCTTCTCCCGAAGTTACAGGG 1116 Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAAC 423 | |||||| ||||||||| |||| |||| || ||| || ||||| |||| | | Sbjct 1117 CTATTTTGCTGAGTTCCTTCGAGAAAGTTGTCTCGCGCCCCTAGGAATTCTTTACCTACC 1176 Query 424 CAC 426 ||| Sbjct 1177 CAC 1179 >seq15061 Length=10779 Score = 147 bits (162), Expect = 6e-33 Identities = 198/274 (72%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||||||| || || ||||||||||| || | ||||||| || |||| Sbjct 2783 CTGCATCTTCACAAACATATCTATTTCACTGAGCCTATGTCCGAGACAGTACCCAGATCG 2842 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| || ||| ||||||||| ||||||| |||||||||||| |||||| |||||||| | Sbjct 2843 TTACACCTTTCATGCAGGTCGAAACTTACACGACAAGGAATTCCGCTACTTTAGGACCAT 2902 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC----AAGAGCTTCGCGTTAGCTAAC 186 ||| | |||| ||||| || |||||||||||| || | ||| | | || | | Sbjct 2903 TATAGCTACGACCGCCATTCACCGGGGCTTCGGTCGCTGACTCCCTTGTCATCAGGTCA- 2961 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 || || | |||||| ||||| |||| | |||| ||| || | | ||| | | Sbjct 2962 CCAATTTCCTGACCTTCTGGCACTAGGCATGTGTCAGCCCCCATGCATGGTCTTACAACT 3021 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCA 280 ||| ||| || ||||||| || ||||||||| Sbjct 3022 TTGTGGAGACCTATGTTTTTGGTAGACAGTCGCA 3055 >seq5036 Length=29953 Score = 138 bits (152), Expect = 3e-30 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| ||||| | | |||||||| || Sbjct 1284 TACTCAGCATCTTCACGGAGAATTCAATTTCACCGAGTCCATGTCGAAGACAGCGGGGCA 1225 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||| ||| |||||| Sbjct 1224 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCACTATCTTAGGG 1165 Query 127 CCGTTATTGTTACGGCCGCCGTTTAC 152 | |||| ||||| |||||||||||| Sbjct 1164 CAGTTAGAGTTACTGCCGCCGTTTAC 1139 >seq19325 Length=11105 Score = 131 bits (144), Expect = 4e-28 Identities = 190/267 (71%), Gaps = 5/267 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| || |||| || || ||||||| || ||| ||||| | ||| |||||| Sbjct 5330 GCATATTTACAGACATGTCTATTTCACCAAGCCTCTATATGAGACGGTGCCCATATCGTT 5271 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | || ||||||| ||||| ||||||||| ||||| |||||||||| ||||||||| ||| Sbjct 5270 ATGCTTTTCGTGCGGGTCGAAACTTACCCAACAAGAAATTTCGCTATCTTAGGACCATTA 5211 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAAC-C 187 | |||| | |||||||| | |||||||||||| | || | | | || | || Sbjct 5210 TAGTTATGACCGCCGTTCATTGGGGCTTCGATCGCCAACTCCCCTATCATCAGGTCACGA 5151 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 | || | | | || || || |||||||||||| ||| |||| | ||| || || Sbjct 5150 ACTTCCTTGACCTTTTCGCCAATGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTT 5091 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACA 274 |||| || ||||||||| |||||| Sbjct 5090 TGCAAAGACATGTGTTTTTGGTAAACA 5064 >seq2312 Length=44952 Score = 120 bits (132), Expect = 8e-25 Identities = 90/106 (85%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||||| Sbjct 25836 TCGTTACACCATTCGTGCAGGTCGTTACTTATGCAACAAGGAATTTCGCTACCTTAGGAC 25895 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173 |||| ||||| | ||||||||||| ||||||| || | ||||| Sbjct 25896 AGTTAGAGTTACTGTCGCCGTTTACCAGGGCTTCCATTCAAAGCTT 25941 >seq2783 Length=41469 Score = 116 bits (128), Expect = 9e-24 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 52 GGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 111 |||||||||| || ||||||| ||||||||||| |||| ||||| ||| ||||||| Sbjct 26958 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAAGTCGCTACTTATGCGATAAGGAAT 26899 Query 112 TTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC 171 |||||||||||||||| ||| ||||| |||| ||||| |||||||| || || ||| Sbjct 26898 TTCGCTACCTTAGGACAATTAGAGTTACTATCGCCATTTACTGGGGCTTCCATTAAAAGC 26839 Query 172 TT 173 || Sbjct 26838 TT 26837 Score = 77.0 bits (84), Expect = 8e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 28413 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 28354 Query 67 ATCGTTACGCCATTCGTGCAGGTCG 91 ||||||| |||||||||||||||| Sbjct 28353 GTCGTTACACCATTCGTGCAGGTCG 28329 >seq18140 Length=7788 Score = 100 bits (110), Expect = 7e-19 Identities = 187/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||| || || || |||| | ||| ||| | |||| || | |||||| Sbjct 6906 GCATCTTCATAGACATGTCTATTTTATCGAGCCTCTCTTTGAGATAGTTTCCAGATCGTT 6965 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | ||| ||||| | | |||||||| |||||| | ||| | ||||||||||| ||| Sbjct 6966 ATGCCTTTCGTAAAATTAAGAACTTACACGACAATAATTTTTGTTACCTTAGGACTTTTA 7025 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||| ||||||| || || ||| ||||| || |||| | | |||| | ||| Sbjct 7026 TAATTATGGCCGCCATTCACTGGGACTTCGGTCGCCAGCTCGCCTGTCATTAGGTCACCA 7085 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT-ATACGTCCACTTTCGTGTT 247 | || |||||||| ||| |||||| || | ||||| |||| | ||| || | Sbjct 7086 ACTTCCTTGACCTTCCGACACTAGGCAGGTGTTA-ACCCTCATACATGGTCTTACGACAT 7144 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||||| |||| |||| |||||||||| Sbjct 7145 TGCAGAGACTTGTGATTTTGGCAAACAGTCGC 7176 >seq5017 Length=30015 Score = 86.0 bits (94), Expect = 2e-14 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||||||||| | |||||||||| || || |||||| | | || | Sbjct 2853 CTGCATCTTCACAGACGTGTCAATTTCACCTAGCTTCTTTCTGAGACAATGTCCAGATTG 2912 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||| ||| ||| ||| ||| ||||||||| | ||||||||||| | | ||||||||| || Sbjct 2913 TTATGCCTTTCATGCGGGTTGGAACTTACTCAACAAGGAATTTTGTTGCCTTAGGACTGT 2972 Query 131 TATTGTT 137 ||| ||| Sbjct 2973 TATGGTT 2979 >seq17591 Length=8274 Score = 82.4 bits (90), Expect = 2e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||||| ||| ||||||||| ||||||||||| ||| |||||||||| ||||||| Sbjct 954 ATCATTACGCCTTTCATGCAGGTCGAAACTTACCCGATAAGAAATTTCGCTATCTTAGGA 895 Query 127 CCGTTATTGTTAC 139 |||| ||||| Sbjct 894 AATTTATAGTTAC 882 >seq9626 Length=19379 Score = 80.6 bits (88), Expect = 7e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146 ||||| ||||||| |||||||||||| ||||||||| ||||||||| |||||| | || Sbjct 13099 GGTCGAAACTTACTTGACAAGGAATTTTGCTACCTTAAGACCGTTATAGTTACGAGCACC 13040 Query 147 GTTTACCGGGGC 158 || |||||||| Sbjct 13039 ATTCACCGGGGC 13028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260292074112