Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq297 230 5e-58 seq247 203 7e-50 seq14803 197 3e-48 seq14352 187 5e-45 seq120 174 3e-41 seq149 172 1e-40 seq12692 145 2e-32 seq4349 132 1e-28 seq2864 118 2e-24 seq13213 91.5 3e-16 seq1569 82.4 2e-13 seq110 77.0 7e-12 >seq297 Length=119073 Score = 230 bits (254), Expect = 5e-58 Identities = 241/310 (78%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 70086 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 70028 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 70027 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 69968 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | | Sbjct 69967 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 69908 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 69907 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 69862 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 69861 CAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 69804 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 69803 GTCCGCCACT 69794 >seq247 Length=183695 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 58832 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 58889 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 58890 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 58949 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| ||| |||||| Sbjct 58950 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCTTTTACCT 59009 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 59010 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 59049 Score = 159 bits (176), Expect = 7e-37 Identities = 189/251 (75%), Gaps = 19/251 (8%) Strand=Plus/Minus Query 88 CCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGT 147 ||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| Sbjct 2549 CCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGC 2490 Query 148 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTC 206 ||| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 2489 TACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCC 2430 Query 207 ATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTA 266 || || ||| || ||| |||| | | | | | || | ||||||| Sbjct 2429 TCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTA 2384 Query 267 GCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACC 324 || |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||| Sbjct 2383 GCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACC 2326 Query 325 CGTCCGCCGCT 335 |||||||| || Sbjct 2325 CGTCCGCCACT 2315 >seq14803 Length=11039 Score = 197 bits (218), Expect = 3e-48 Identities = 146/169 (86%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| ||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 6767 CACGAGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 6709 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| |||||||| ||| |||||||| |||||||||||||| |||||| | Sbjct 6708 CCATAGGAGTCTGGGCCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 6649 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 || ||| ||| |||||| ||| ||||||||||||||||||||||| || Sbjct 6648 ACTGATGATCGTCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGA 6600 Score = 190 bits (210), Expect = 4e-46 Identities = 145/170 (85%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| | ||||| || ||||||||||||||||||| || |||||||| ||||||||| Sbjct 523 CACGAGTCATTG-CTCCGTCAGGCTTTCGCCCATTGTAGAAAATTCCCCATTGCTGCCTC 465 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||| ||| || ||||||||| |||||||| |||||||||||||| |||||| | Sbjct 464 TTGTAGGAGTTTGGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 405 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||| ||||| ||| ||||||||||||||||||||||| ||| Sbjct 404 ACTGATCATCGCGTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGAC 355 >seq14352 Length=11509 Score = 187 bits (206), Expect = 5e-45 Identities = 154/184 (84%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 14 AGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATT 73 || |||||| | | |||||||||||| || ||| |||| || |||||| || ||| Sbjct 2213 AGGCCTTCTACCTC-CACGCGGCATTG-CTCTGTCAAACTTTTGCTCATTGTGGAAAATT 2156 Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133 ||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||| Sbjct 2155 CCCCACTGCTGCCTCCC-TAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCAT 2097 Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 | |||| |||||| || |||| |||||||||| ||| |||||||||||||||| ||||| Sbjct 2096 CTTCTCGGACCAGCTATTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTATCTAAT 2037 Query 194 CCGA 197 | || Sbjct 2036 CAGA 2033 >seq120 Length=115836 Score = 174 bits (192), Expect = 3e-41 Identities = 134/159 (84%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95 |||| ||| || |||||||| ||||||| || |||||||| || ||||||||||||| Sbjct 33822 CATTTGCTCCATGAGGCTTTCTCCCATTGCGGAAAATTCCCCATTGTTGCCTCCCGTAGG 33881 Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 ||||||| ||||||||||| |||||||| ||||||||||||| || || || |||| Sbjct 33882 AGTCTGGGTCGTGTCTCAGTCCCAGTGTGGTTGATCATCCTCTCGGAACAACTATTGATC 33941 Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||||||| ||| ||||||||||||||||||||||| Sbjct 33942 ATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATC 33980 >seq149 Length=111170 Score = 172 bits (190), Expect = 1e-40 Identities = 156/194 (80%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 6 CAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGT 65 ||| ||| |||||||| | | ||| ||| || || || ||||||||||| |||| Sbjct 35742 CAACCCGTGGACCTTCTACCTC-CACATAGCAATG-CTCCATTAGGCTTTCGCCAATTGC 35685 Query 66 CCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGA 125 || ||| ||| |||||||||||| ||||||||||| |||||||||| | |||||| | Sbjct 35684 GGAAAATTTCCCGCTGCTGCCTCCCATAGGAGTCTGGGCCGTGTCTCAATCCCAGTGCGG 35625 Query 126 CTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAAC 185 ||||||||||||| || ||| ||| |||| ||||||| || ||| |||||||||||||| Sbjct 35624 ATGATCATCCTCTCGGAACAGCTACTGATCATCGCCTTCGTAAGCTATTACCTCACCAAC 35565 Query 186 TAGCTAATCCGACC 199 ||||||||| |||| Sbjct 35564 TAGCTAATCAGACC 35551 >seq12692 Length=13512 Score = 145 bits (160), Expect = 2e-32 Identities = 120/145 (83%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||||||||| || | |||||||| |||||| || |||||||||||||||||| Sbjct 12000 CATGCGGCATTG-CTCCGTTAGGCTTTCTCCCATTACGGAAAATTCCCCACTGCTGCCTC 12058 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||| ||| | |||||| ||||||||||||| |||||| | Sbjct 12059 CCGTAGGAGTCTGGGCCGTGTCTTAGTCCTAGTGTGGTTGATCATCCTCTCGGACCAGCT 12118 Query 149 ACGGATCGTCGCCTTGGTGAGCCAT 173 || |||| |||| ||||| ||| || Sbjct 12119 ACTGATCATCGCGTTGGTAAGCTAT 12143 >seq4349 Length=32798 Score = 132 bits (146), Expect = 1e-28 Identities = 173/234 (74%), Gaps = 19/234 (8%) Strand=Plus/Minus Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164 ||||| ||||| |||||||| |||||||||||||| |||||| ||| |||| |||||||| Sbjct 8559 CGTGTGTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTG 8500 Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGC 223 || ||| ||||||||||||||||||||||| ||| | || | | || || ||| Sbjct 8499 GTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC 8448 Query 224 CCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACG 283 || ||| |||| | | | | | || | ||||||||| |||||||| | Sbjct 8447 -----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAGCAACCGTTTCCAGTTG 8394 Query 284 TTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 || | ||| || ||| ||||| ||| || || ||||||||||||||||| || Sbjct 8393 TTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 8342 >seq2864 Length=49046 Score = 118 bits (130), Expect = 2e-24 Identities = 99/119 (83%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| || ||||||||||||||||||||||||| |||||| Sbjct 38924 CCTTCTT-CACTCACGCGATATTG-CTAGATCAGGCTTTCGCCCATTGTCCAAGATTCCC 38867 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCC 135 || |||||| ||||| ||| || | | |||||||||| ||| |||| ||||| |||| Sbjct 38866 CAATGCTGCTCCCCGTGGGAATCCAGGCTGTGTCTCAGTCCCACTGTGGCTGATAATCC 38808 >seq13213 Length=12877 Score = 91.5 bits (100), Expect = 3e-16 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 50 GGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT 109 || |||||||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct 6759 GGGTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGT 6700 Query 110 CTCAGTTCCAGTGTGACT 127 ||||| ||| |||| || Sbjct 6699 TTCAGTCCCAATGTGGCT 6682 >seq1569 Length=53563 Score = 82.4 bits (90), Expect = 2e-13 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 60 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119 |||||| || ||| || || |||||||| ||| |||||| | ||||||||||||||| Sbjct 13882 CATTGTGAAAAGATCCTCATTGTTGCCTCCCATAGAAGTCTG-ATCGTGTCTCAGTTCCA 13824 Query 120 GTGTGACTGATCATCCTCTCAGACC 144 || ||| ||||||||||||| |||| Sbjct 13823 GTATGATTGATCATCCTCTCGGACC 13799 >seq110 Length=179048 Score = 77.0 bits (84), Expect = 7e-12 Identities = 69/88 (78%), Gaps = 8/88 (9%) Strand=Plus/Minus Query 111 TCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGC 170 ||||| |||||||| |||||||||||||| ||| || ||| |||| ||| |||||| ||| Sbjct 138315 TCAGTCCCAGTGTGGCTGATCATCCTCTCGGACTAGCTACTGATCATCGTCTTGGTAAGC 138256 Query 171 --------CATTACCTCACCAACTAGCT 190 |||||||||||||||||| Sbjct 138255 TTTTTTTTTTTTACCTCACCAACTAGCT 138228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071568134080