Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq297 235 1e-59 seq247 197 3e-48 seq16668 194 4e-47 seq15502 113 1e-22 seq19837 111 4e-22 seq2 111 4e-22 seq1139 107 5e-21 seq6356 105 2e-20 seq3532 98.7 2e-18 seq423 89.7 1e-15 seq567 82.4 2e-13 seq1969 80.6 7e-13 seq6827 77.0 8e-12 seq228 73.4 1e-10 >seq297 Length=119073 Score = 235 bits (260), Expect = 1e-59 Identities = 310/414 (75%), Gaps = 13/414 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 74396 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 74340 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 74339 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 74284 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | ||||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 74283 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 74226 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || | | Sbjct 74225 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACATT 74167 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || ||||||||| | ||||||||||||||| | ||||| Sbjct 74166 CTCCTCCCACTGCTTGGGAGCTCACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 74108 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 74107 TCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 74048 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 74047 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 73994 >seq247 Length=183695 Score = 197 bits (218), Expect = 3e-48 Identities = 302/414 (73%), Gaps = 21/414 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 6503 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 6447 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 6446 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 6391 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | ||||||| ||||||||| |||||||||| ||| | ||| |||| | Sbjct 6390 GAC-AATCGCCCTATGAAGACTCGC-TTTCGCTACGGCTCTGGTGGGTTCCCTTAA-CCA 6334 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || | | Sbjct 6333 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACATT 6274 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||| | | || ||||||||| | || |||||||||||| | ||||| Sbjct 6273 CTCCTCCC-------GGA-GCTCACGGTTTCATGTTCGATTTCACTCCCCGAT-GGGGGT 6223 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 6222 TCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 6163 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 6162 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 6109 >seq16668 Length=9150 Score = 194 bits (214), Expect = 4e-47 Identities = 275/371 (74%), Gaps = 13/371 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || || || |||||||| || |||||| ||||| | Sbjct 3040 CCACAACTCAT-CCGCTGA-TTCTTAAATATCAGTCGGTTTGGACCTCCACTTAGTT-TC 3096 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || ||||||||| | | | Sbjct 3097 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCTATAAGCAA-C 3152 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | ||||||| ||| ||||||||| |||||| |||| | ||| |||| | Sbjct 3153 GACAAT-CGCCCTATGAAGTCTCGCTTTT-GCTACGGCTCCTGTGGGTTCCCTTAACCAA 3210 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || | | Sbjct 3211 -GCCACTGTCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACATT 3269 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| | || |||||| | ||||||||| ||||| | ||||| Sbjct 3270 CTCCTCCCACTGCTTGGGATCTCACTGTTTCATGTTCTATTTCATTCCCCGATG-GGGGT 3328 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 | ||||| ||||||||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 3329 TTTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 3388 Query 367 TGGAGGATGGT 377 || | | |||| Sbjct 3389 TGCAAGGTGGT 3399 Score = 134 bits (148), Expect = 3e-29 Identities = 230/318 (72%), Gaps = 13/318 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || || || |||||||| || |||||| ||||| | Sbjct 2015 CCACAACTCAT-CCGCTGA-TTCTTAAATATCAGTCGGTTTGGACCTCCACTTAGTT-TC 2071 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || ||||||||| | | | Sbjct 2072 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCTATAAGCAA-C 2127 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | ||||||| ||| ||||||||| |||||| |||| | ||| |||| | Sbjct 2128 GACAAT-CGCCCTATGAAGTCTCGCTTTT-GCTACGGCTCCTGTGGGTTCCCTTAACCAA 2185 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || | | Sbjct 2186 -GCCACTGTCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACATT 2244 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| | || |||||| | ||||||||| ||||| | ||||| Sbjct 2245 CTCCTCCCACTGCTTGGGATCTCACTGTTTCATGTTCTATTTCATTCCCCGAT-GGGGGT 2303 Query 307 TCTTTTCGCCTTTCCCTC 324 | ||||| |||||||||| Sbjct 2304 TTTTTTCACCTTTCCCTC 2321 >seq15502 Length=10299 Score = 113 bits (124), Expect = 1e-22 Identities = 150/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 212 CATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATAC 271 |||| | ||| ||| || | |||| | || | | ||| |||| |||| | || Sbjct 7534 CATTCTTCAACAGGCACACGGTCAGAGATCACATTCTCCTCTCACTACTTGGGAGTTCAC 7475 Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 | ||||| | |||||||||||||| | |||||||||||| ||||||||||| ||||| Sbjct 7474 GATTTCATGTTCTATTTCACTCCCTGATG-GGGGTTCTTTTCACCTTTCCCTCATGGTAC 7416 Query 332 TAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 391 || || |||||||||| | || |||||||||||||| | |||||| | ||||| Sbjct 7415 TACTTTGCTATCGGTCACTTAGGAGTATTTAGCCTTGCAATGTGGTCCTTGCTGATTCAC 7356 Query 392 ACAAAGTTTCTCGTGCTCCGTCCTACT 418 || || | ||||| |||| ||||| Sbjct 7355 ACGGGATTACACGTGCCCCGTGCTACT 7329 >seq19837 Length=6469 Score = 111 bits (122), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 3207 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 3149 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 3148 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 3089 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 3088 GTGGTCCCCC 3079 >seq2 Length=225651 Score = 111 bits (122), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| |||||||| | ||||||||||| Sbjct 48467 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 48409 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 48408 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 48349 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 48348 GTGGTCCCCC 48339 >seq1139 Length=66400 Score = 107 bits (118), Expect = 5e-21 Identities = 114/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 ||||||| | ||| ||||||||||| | |||||||||||| ||||||||||| || Sbjct 30519 GGTTTCATGCTCTTTTTCACTCCCCGATG-GGGGTTCTTTTCACCTTTCCCTCATATAAC 30577 Query 332 TAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 391 || ||| |||||||||| ||| |||||||||||||| | | |||||| | ||||| Sbjct 30578 TACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCAC 30637 Query 392 ACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | || | ||||| |||| ||||||| Sbjct 30638 ATGGGATTCCACGTGCCCCGTGCTACTCG 30666 >seq6356 Length=25604 Score = 105 bits (116), Expect = 2e-20 Identities = 99/124 (80%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 261 TGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 ||| ||||| | | ||||| ||| ||| |||||||| | |||||||||||| |||| Sbjct 18315 TGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTTCACCTT 18257 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| || | |||||||||| | || | || |||| ||| |||| ||||| Sbjct 18256 TCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTC 18197 Query 379 CCCC 382 |||| Sbjct 18196 CCCC 18193 >seq3532 Length=36858 Score = 98.7 bits (108), Expect = 2e-18 Identities = 89/109 (82%), Gaps = 6/109 (6%) Strand=Plus/Plus Query 275 TTCAGGATCTATTTCACTCCCCTCT----CCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||| | ||||||||||||||| | | |||||||||| | || ||| ||||||||| Sbjct 9039 TTCATGTTCTATTTCACTCCCCGATGGGGCGGGGGTTCTTTCCACCATTCTCTCACGGTA 9098 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG-GAGGATGGTC 378 ||| ||| |||||||||| ||| |||||||||||||| |||| ||||| Sbjct 9099 CTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCGAGG-TGGTC 9146 >seq423 Length=84459 Score = 89.7 bits (98), Expect = 1e-15 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || ||||||||| | | ||||||||||| |||||||||||| || Sbjct 36005 ACGGTTTCATGTTCGATTTCACTCTCTGATA--GGGTTCTTTTCACCTTTCCCTCACTGT 35948 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||| ||| |||||||||| || |||||||| |||| Sbjct 35947 ACTACTTCGCTATCGGTCACCCAAGAGTATTTAACCTT 35910 >seq567 Length=78608 Score = 82.4 bits (90), Expect = 2e-13 Identities = 77/97 (79%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||| ||||| | |||||||||| ||| || | || |||||| |||| | ||||||| Sbjct 42347 ACGATTTCATGCCCTATTTCACTTCCCGATC--GAGTGCTTTTCAACTTTTCATCACGGT 42404 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||| ||| |||||||||| ||| |||||||||||| Sbjct 42405 ACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT 42441 >seq1969 Length=75583 Score = 80.6 bits (88), Expect = 7e-13 Identities = 93/124 (75%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 197 AATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCAC 256 ||| |||||| | | |||| | ||| ||| |||| |||| | || | | ||||||| Sbjct 5327 AATGAGTCGCCGGCTCATTTTTCAACAGGCACGCGGTCAGAGATCACATTCTCCTCCCAC 5386 Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316 | |||| || ||||||||| | ||||||||||||||| | |||||||||||| || Sbjct 5387 TACTTGGGAGCTCACGGTTTCATGTTCTATTTCACTCCCCGAT-GGGGGTTCTTTTCACC 5445 Query 317 TTTC 320 |||| Sbjct 5446 TTTC 5449 >seq6827 Length=24293 Score = 77.0 bits (84), Expect = 8e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||||||||||| ||||||||||||||||||| ||| |||||||||| || ||||||| Sbjct 3850 GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAAGAGTATTT 3909 >seq228 Length=100363 Score = 73.4 bits (80), Expect = 1e-10 Identities = 54/62 (87%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 ||||||| | || |||||||||||| | |||||||||||| ||||||||||||||||| Sbjct 45284 GGTTTCATGTTCGATTTCACTCCCCGATG-GGGGTTCTTTTCACCTTTCCCTCACGGTAC 45226 Query 332 TA 333 || Sbjct 45225 TA 45224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241099809024