Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq297 217 3e-54 seq2 167 5e-39 seq247 163 7e-38 seq5098 149 1e-33 seq16668 145 2e-32 seq3694 125 2e-26 seq4845 105 2e-20 seq2288 105 2e-20 seq27884 91.5 3e-16 seq7843 91.5 3e-16 seq12750 87.8 4e-15 seq19325 75.2 3e-11 >seq297 Length=119073 Score = 217 bits (240), Expect = 3e-54 Identities = 300/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 75012 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 74953 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 74952 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 74893 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || ||||| || | | ||| ||||| || || | | Sbjct 74892 ACATTCTCGCTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTC-CCTCTAAGGC 74837 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 74836 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 74781 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 74780 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 74722 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 74721 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 74662 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 74661 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 74613 >seq2 Length=225651 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 49103 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 49047 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 49046 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 48987 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 48986 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 48927 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 48926 GTTTCCCTCTCG 48915 >seq247 Length=183695 Score = 163 bits (180), Expect = 7e-38 Identities = 154/194 (79%), Gaps = 7/194 (4%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 6898 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 6841 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| | || |||||||||| ||||| Sbjct 6840 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTC 6781 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| ||||||| || |||||||||||||||| ||||| ||| Sbjct 6780 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGG 6721 Query 387 CTGTTTCCCTCTCG 400 ||||||||| Sbjct 6720 -----TCCCTCTCG 6712 >seq5098 Length=40492 Score = 149 bits (164), Expect = 1e-33 Identities = 149/192 (78%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| | ||| || ||||||| Sbjct 4353 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTACCATGGAG---CTAGACCAGT 4297 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 | |||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 4296 GGGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 4237 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| ||||||| ||||||| | |||||||| | Sbjct 4236 CTCAATCACTTCCTTTTCCACTAAGTGGTTGCTTAGGGACCTTAGCGTACGATCTGGGTT 4177 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 4176 GTTTCCCTCTCG 4165 >seq16668 Length=9150 Score = 145 bits (160), Expect = 2e-32 Identities = 287/411 (70%), Gaps = 24/411 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCC---AGGGCAGACAAACTTG 57 ||||||||||| |||| || |||||| || ||||||||| | || || | |||| Sbjct 1439 CGACTACGCCTTTCGGTCTGATCTTAGGCCCTGACTCACCCTCCATGGATGA--ACCTTG 1496 Query 58 ACCCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATG 116 | |||||| || | | | || | |||||| |||| | || |||||| | Sbjct 1497 -CAGAGGAACCTTTAGGTGTTTGGGTCATTGGATTCTCACCAATGTTTGCGTTACTCAAG 1555 Query 117 CCTGCATTCTCACTC-GCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGAC 175 || ||||||| ||| || ||| | |||| || ||| ||||| || || | Sbjct 1556 CCGACATTCTCGCTCCGCTTCATCCACACCTGCTTGTG---CGGGTGCTTC-CCTCTAAG 1611 Query 176 ACG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 | ||||||||||||| | || ||| | ||||| |||||| ||| |||| Sbjct 1612 GTGGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAACTTCGGTAGATCGCTTA 1668 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 |||||| | ||| || |||| | | || || ||||||||||||| | |||||||| Sbjct 1669 -GCCCCGTT-CATCTTCAGCGCAAGAGCGCTCGATCAGTGAGCTATTATGTGCTCTTTCA 1726 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 ||| |||||||||| | | ||||||||| |||||| ||| | | ||||||||| ||| Sbjct 1727 AGGGTGGCTGCTTCTAGGAAAACCTCCTGATTGTCTCTGCACCCCTACATCCTTTATCAC 1786 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| | | ||||||||||||| Sbjct 1787 CGAGCAGTCATTTAGGGGCCTTAGCTGGTGATC-GAGTTGTTTCCCTCTCG 1836 Score = 145 bits (160), Expect = 2e-32 Identities = 287/411 (70%), Gaps = 24/411 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCC---AGGGCAGACAAACTTG 57 ||||||||||| |||| || |||||| || ||||||||| | || || | |||| Sbjct 2464 CGACTACGCCTTTCGGTCTGATCTTAGGCCCTGACTCACCCTCCATGGATGA--ACCTTG 2521 Query 58 ACCCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATG 116 | |||||| || | | | || | |||||| |||| | || |||||| | Sbjct 2522 -CAGAGGAACCTTTAGGTGTTTGGGTCATTGGATTCTCACCAATGTTTGCGTTACTCAAG 2580 Query 117 CCTGCATTCTCACTC-GCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGAC 175 || ||||||| ||| || ||| | |||| || ||| ||||| || || | Sbjct 2581 CCGACATTCTCGCTCCGCTTCATCCACACCTGCTTGTG---CGGGTGCTTC-CCTCTAAG 2636 Query 176 ACG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 | ||||||||||||| | || ||| | ||||| |||||| ||| |||| Sbjct 2637 GTGGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAACTTCGGTAGATCGCTTA 2693 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 |||||| | ||| || |||| | | || || ||||||||||||| | |||||||| Sbjct 2694 -GCCCCGTT-CATCTTCAGCGCAAGAGCGCTCGATCAGTGAGCTATTATGTGCTCTTTCA 2751 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 ||| |||||||||| | | ||||||||| |||||| ||| | | ||||||||| ||| Sbjct 2752 AGGGTGGCTGCTTCTAGGAAAACCTCCTGATTGTCTCTGCACCCCTACATCCTTTATCAC 2811 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| | | ||||||||||||| Sbjct 2812 CGAGCAGTCATTTAGGGGCCTTAGCTGGTGATC-GAGTTGTTTCCCTCTCG 2861 >seq3694 Length=36050 Score = 125 bits (138), Expect = 2e-26 Identities = 113/142 (80%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 ||||| |||||||||||||||||||||||||||| |||||||||| | || |||||| || Sbjct 20409 CTTGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCATG 20468 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 | ||||| ||| | | | |||||| ||||||| || ||||||||||||||| | Sbjct 20469 GCTGTCTCTGCACCCCTGCCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTAGT 20528 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 |||| ||| ||||||||| Sbjct 20529 GATCCGGG-----TCCCTCTCG 20545 >seq4845 Length=30621 Score = 105 bits (116), Expect = 2e-20 Identities = 126/167 (75%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||| ||||||||| || |||| | |||| | ||| ||||||| | || || || Sbjct 18043 CCATAGCTTCGGCATATCGCTTA-GTCCCGTT-CATCTTCGGCGCAAGAGTGCTCGATCA 17986 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||| ||||||||||||||||| ||| |||||| | || |||||| ||| ||||| Sbjct 17985 GTGAGCTACTACGCACTCTTTCAAGGGTGGTTGCTTCTAGGCAAACCTCATGGCTGTCT- 17927 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAG 373 | || | | || |||||| ||||||| || |||| |||||||| Sbjct 17926 CTCACCCCTACTTCCTTTATCACTGAGCGGTCATTTAGAGGCCTTAG 17880 >seq2288 Length=45142 Score = 105 bits (116), Expect = 2e-20 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 209 ACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGT 268 ||| ||||| ||| |||| |||| | | ||| |||| || | | || || |||| Sbjct 39857 ACATCTTCGATAGATCGCTTA-GCCCAGTT-CATCTTCGGTGCAAGAGCGCTCGATCAGT 39914 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||| ||| ||||||||||||| |||||||||| | || |||||||| ||||| | Sbjct 39915 GAGCTACTACACACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTAACTGTCTTTG 39974 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | | | || | |||| |||| || | || |||| |||||||| ||||||||| | Sbjct 39975 GACCCCTACCTTCTTTATCACTAAGCAGTTATTTGGGGGGCTTAGCTGGTGATCTGGGTT 40034 Query 389 GTTTCCCTCTCG 400 |||| |||||| Sbjct 40035 GTTTTTCTCTCG 40046 >seq27884 Length=2204 Score = 91.5 bits (100), Expect = 3e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 || |||||||||||||| ||||||||||||| | |||||||| | || |||||||||||| Sbjct 874 GATCAGTGAGCTATTACACACTCTTTCAAGGGTTGCTGCTTCTAGGCAAACCTCCTGGTT 815 Query 322 GTCTACGCAACTCCACATCCTTT 344 |||| ||| | | || |||||| Sbjct 814 GTCTCTGCACCCCTACCTCCTTT 792 >seq7843 Length=21845 Score = 91.5 bits (100), Expect = 3e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 || |||||||||||||| ||||||||||||| | |||||||| | || |||||||||||| Sbjct 9096 GATCAGTGAGCTATTACACACTCTTTCAAGGGTTGCTGCTTCTAGGCAAACCTCCTGGTT 9037 Query 322 GTCTACGCAACTCCACATCCTTT 344 |||| ||| | | || |||||| Sbjct 9036 GTCTCTGCACCCCTACCTCCTTT 9014 >seq12750 Length=13430 Score = 87.8 bits (96), Expect = 4e-15 Identities = 100/133 (75%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327 ||||||||||| ||||||||||||| || |||||| | || || ||||||| ||||| Sbjct 820 TGAGCTATTACACACTCTTTCAAGGGCGGTTGCTTCTATGCAAATCTCCTGGATGTCT-- 877 Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387 ||| | | |||||| ||| || || || |||| ||||||| | ||||| | Sbjct 878 GCACCCTTAACTCCTTTATCACCAAGCCATCATTTAGAGGCCTTA---GGTGATCCAAGT 934 Query 388 TGTTTCCCTCTCG 400 ||||||||||||| Sbjct 935 TGTTTCCCTCTCG 947 >seq19325 Length=11105 Score = 75.2 bits (82), Expect = 3e-11 Identities = 85/109 (78%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGA-ATCACTTGACC 265 ||||| ||||| | ||| |||| ||||| | ||| ||| ||| | | |||| || | Sbjct 4473 CCACAACTTCGACAGATCGCTTA-GCCCCATT-CATCTTCG-CGCAAAGAGCACTCGATC 4417 Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCT 314 ||||||||||||| | |||||||||||||||||||||| | | ||||| Sbjct 4416 AGTGAGCTATTACACTCTCTTTCAAGGATGGCTGCTTCTAGACAAACCT 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177125592064