Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq297 277 4e-72 seq247 226 7e-57 seq14352 174 4e-41 seq14803 168 2e-39 seq1657 165 2e-38 seq9539 132 1e-28 seq11058 120 7e-25 seq2182 118 3e-24 seq248 113 1e-22 seq11734 86.0 2e-14 seq5502 73.4 1e-10 >seq297 Length=119073 Score = 277 bits (306), Expect = 4e-72 Identities = 306/405 (76%), Gaps = 2/405 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| ||||||||||||||||||| || ||| || ||| Sbjct 70147 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 70206 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || | ||||| | || ||| Sbjct 70207 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTGTCAAGTCCGCCGTCAAA 70266 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 70267 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 70326 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | ||| |||||||||||||||||| || | | |||||||| |||||| Sbjct 70327 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 70386 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || |||||| | | |||||||||||| ||||||| |||||||||| ||||| Sbjct 70387 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 70446 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| ||||||||||||| |||||||| | | | ||| || | Sbjct 70447 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 70505 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 70506 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 70550 >seq247 Length=183695 Score = 226 bits (250), Expect = 7e-57 Identities = 256/340 (75%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| ||||||||||| |||| |||||||||||||||||||| ||| |||||| Sbjct 58801 ACTCGAGGAAGAAGCCCCGGCAAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 58742 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 58741 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 58682 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 58681 AAAGTC---GCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 58628 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| || |||| | | |||||| ||| Sbjct 58627 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTACGAAGGAACGCCAA 58568 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| |||||| ||||||| |||||||| || Sbjct 58567 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGAGGTGCGAAAGCATGGGGAGCGAA 58508 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||||||||||||||||||||| |||||||||||||| Sbjct 58507 CAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 58468 >seq14352 Length=11509 Score = 174 bits (192), Expect = 4e-41 Identities = 244/340 (72%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||| |||| | ||||||| ||||||||||||||||||| | ||| || ||||| Sbjct 2259 AGGAATAAGCATCAGCTAACTCTGTGCCAGCAGCCGCGGTAAGATAGAGGATGCAAGCGT 2318 Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126 |||| |||| | ||||||||||| | |||||||| || | ||||| | || ||| Sbjct 2319 AATCCAGAATGATTGGGCGTAAAGCATCTGTAGGTGGCTTGTCAAGTCCGCCGTCAAATC 2378 Query 127 CTATGGCTCAACCCCGGGA-CTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAA 185 | | |||||||||| ||| || | ||||| | ||| |||| ||| ||||||| Sbjct 2379 CCAGGGCTCAACCCGTGGATAGGCGGTGAAAACTACCAAGCTGGAGTACAGTAGGGGCAG 2438 Query 186 GTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAG 245 |||||| | ||| ||||||||||| | |||| || | | |||||||| || | || Sbjct 2439 AGGGAATTTTTGGTGGAGCGGTGAAAT-CCTAGAGATAAAAAAGAACACCAATGACAAAA 2497 Query 246 GCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 || || ||| | ||| |||||||| ||| || | |||||||| ||||| Sbjct 2498 GCACTCTGTTGGGTCGACACTAACACTGAGAGATGAACGCTAGTGGAGCAAATGAGATTA 2557 Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 |||||| ||||||| |||||||||||| |||||||| Sbjct 2558 CATACCCCAGTAGTCCTAACCGTAAACGATGGATACTAGG 2597 >seq14803 Length=11039 Score = 168 bits (186), Expect = 2e-39 Identities = 242/341 (71%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| |||| |||| ||||||||| | ||| || ||| Sbjct 584 TGAGGAATAAGCATCGGCTAACTCTGTGCTAGCAACCGCGGTAAGATAGAGGATGCAAGC 643 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||||| |||||||||| || |||||| || | | ||| | | ||| Sbjct 644 GTTATCCGGAATTATTGGGCGTAAAACGTCTCTAGGTGTCTTGTCATGTCCGCCATCAAA 703 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | |||||||||| || ||| | |||| | | ||| |||| | |||||| Sbjct 704 TCTCAGGGCTCAACCCTGGACATGCGGTGGAAAGTACCAAGCTGGAGTACGATTGGGGCA 763 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| || ||| |||||| |||||| |||| || | | |||||||| | || Sbjct 764 GAGGGAATTTCTGGTGGAGCGGTAAAATGCATAGAGATCGGAAAGAACACCAACCACAAA 823 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || || ||| | |||||||||||| ||||||| |||||| ||| ||||| Sbjct 824 AGCACTATGGTGGGTCGACACTGACACTGAGAGACGAAAGCTAGGGGAGAAAATGGGATT 883 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 ||||| || ||||||| || ||||||||| |||||||| Sbjct 884 AGATATCCCAGTAGTCCTGGCAGTAAACGATTGATACTAGG 924 Score = 93.3 bits (102), Expect = 1e-16 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| ||| ||||||| |||||| || ||| || ||| Sbjct 6828 TGAGGAATAAGCATCGGCTAACTCTATGCTAGCAGCCACGGTAAGACAGAGGATGCAAGC 6887 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| ||||||||||| || |||| ||| || | ||||| | || ||| Sbjct 6888 GTTATCCGGAATGTTTGGGCGTAAAGCGTCTGTAGTTGGCTTGTCAAGTCTGTCGTTAAA 6947 Query 125 GGCTATGGCTCAACCCCGG 143 | | ||||||||| || Sbjct 6948 TCCCAGAGCTCAACCCTGG 6966 >seq1657 Length=52216 Score = 165 bits (182), Expect = 2e-38 Identities = 196/266 (74%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 31 TGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAG 90 |||||||||||||||||| || ||| || || |||||||||||| | ||||||||||| Sbjct 19281 TGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGAGTTATCCGGAATGATTGGGCGTAAAG 19340 Query 91 GGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCT 150 || |||||||| || | ||||| | || ||| ||| || ||||||| || || Sbjct 19341 CGTCTGTAGGTGGCTTGTCAAGTCCGCCGTCAAATCCTAGGGATCAACCCTGGACAGGCG 19400 Query 151 TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAA 210 | |||||| | ||| |||| | | |||||||| |||||| | || ||||||||| Sbjct 19401 GTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAAAGGGAATTTCCGATGGAGCGGTGAA 19460 Query 211 ATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACA 270 ||||||||| || | | |||||||| | |||| || | |||| | | ||||||| Sbjct 19461 ATGCGTAGAGATCGGAAAGAACACCAACGACGAAAGCACTCTACTGGGCCGACACTGACA 19520 Query 271 CTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||| ||||||| | ||||||| Sbjct 19521 CTGAGAGACGAAAGCTAGTGGAGCAA 19546 >seq9539 Length=18414 Score = 132 bits (146), Expect = 1e-28 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||| |||| | |||||| |||||||| || |||| | | |||||| ||| ||||| Sbjct 532 AGTGAAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTACGAAGGAACGCCAAAAGCGAA 591 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || ||| |||| || ||| |||||| ||||||| |||||||| ||||||||| Sbjct 592 GGTAGCTCTCTGGGTCCCTACCGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATT 651 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||||||||||| |||||||||||||| Sbjct 652 AGATACCCTGGTAGTCCATGCCGTAAACGATGA 684 >seq11058 Length=15828 Score = 120 bits (132), Expect = 7e-25 Identities = 233/342 (68%), Gaps = 9/342 (3%) Strand=Plus/Plus Query 4 TTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAG 63 || |||| |||| ||||||||| |||||| | | || |||| || ||| || || Sbjct 14055 TTAAGGAATAAGCGTCGGCTAACTCTGTGCCAACGGTCGTAGTAAGACAAAGGACGCAAG 14114 Query 64 CGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAA 123 ||||||||||||| | | |||||||| | |||||||| || ||||| || || Sbjct 14115 CGTTATCCGGAATGATTAGGCGTAAATCATTTGTAGGTGGCTTGCCAAGTCCCTAGTCAA 14174 Query 124 AGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGC 183 | | | |||||||| | || ||| | |||||| | |||||| | |||||| Sbjct 14175 ATCCCAAGGCTCAACACTGGACATGCAGTGGAAACTACCAAGCTAGA--TATGTAGGGGC 14232 Query 184 AAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243 | |||||| |||||| ||| |||||| ||||| || | ||||||| | ||| Sbjct 14233 AGAGGGAATTTCTAGTGGAGCAATGAAATATGTAGAGATCGAAAAAAACACCAACGACGA 14292 Query 244 AGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGAT 303 | || |||||| || |||||||| ||||||| ||||||||| ||| Sbjct 14293 AAGCATTCTGCTGG------GCTAACACTGAGAGACGAAAGCTATGGGAGCAAATGAGAT 14346 Query 304 TAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 |||||| | ||||||| | ||||| ||| |||||||| Sbjct 14347 TAGATA-TCACGTAGTCCTAGTTGTAAAGAATGGATACTAGG 14387 >seq2182 Length=78787 Score = 118 bits (130), Expect = 3e-24 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||| |||| | |||||| |||||||| || |||| | | |||||| ||| ||||| Sbjct 27689 AGTGCAATTTCGTGTGTAGGGGTGAAATCCGCAGATCTATGAAGGAACGCCAAAAGCGAA 27748 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 ||| ||| |||| || || |||||| ||||||| ||||||| |||| |||| Sbjct 27749 GGCAGCTCTCTGGGTCCCTACCGATGCTGAGGTGCGAAAGCATGGGGAGAGAACAAGATT 27808 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||||||||||| | |||||||||||| Sbjct 27809 AGATACCCTGGTAGTCCATGTCGTAAACGATGA 27841 >seq248 Length=99003 Score = 113 bits (124), Expect = 1e-22 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 ||| |||| | | ||||||| | |||| ||| |||||||||||| ||||| | Sbjct 70908 GCTGGAGTACGGTAGGGGCACAGGAAATTTTCGGTGGAGCGGTGAAATGTGTAGAGACCG 70967 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284 | | |||||||| | |||| || |||||| | | ||| |||||||| |||||| Sbjct 70968 GAAAGAACACCAACGTCGAAAGCACTCTGCTGGGCCGACACTAACACTGAGAGACGAAAG 71027 Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 | |||||||||| ||||||||||||| || ||| ||| ||||||||| ||||||| Sbjct 71028 CTAGGGGAGCAAATGGGATTAGATACCCCAATAATCCTAGCCATAAACGATGGATACTAG 71087 Query 345 GT 346 || Sbjct 71088 GT 71089 >seq11734 Length=14829 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 265 CTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACG 324 |||||||| || ||||||| | ||||||||| |||||||||||||| | ||||| | Sbjct 2146 CTGACACTAAGAGACGAAAGC-TAGGGAGCAAATGGGATTAGATACCCTAGAAGTCCTAG 2088 Query 325 CCGTAAACGATGAATACTAGGTGT 348 ||||||| |||| ||||||||||| Sbjct 2087 CCGTAAATGATGGATACTAGGTGT 2064 >seq5502 Length=30634 Score = 73.4 bits (80), Expect = 1e-10 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 ||| |||| || |||||||| |||||| ||| |||| |||||||||||||||| | Sbjct 3804 GCTGGAGTACAATAGGGGCAAAGGGAATTTTCGGTGGAGCGATGAAATGCGTAGATATCA 3745 Query 225 GGAGGAACACCAGTGGCGAAGGC 247 | | |||||||| ||||||| || Sbjct 3744 GAAAGAACACCAATGGCGAAAGC 3722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202715278848