Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8641 693 0.0 seq33548 495 1e-137 seq15579 248 3e-63 seq4469 215 2e-53 seq1740 199 1e-48 seq1444 179 1e-42 seq118 149 2e-33 seq7389 127 7e-27 seq18055 86.0 2e-14 seq5553 82.4 2e-13 seq2 78.8 3e-12 >seq8641 Length=56469 Score = 693 bits (768), Expect = 0.0 Identities = 478/537 (89%), Gaps = 10/537 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 34760 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 34819 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 34820 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 34879 Query 127 GGCCCGCGAA---GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 |||||||| || |||| ||| || || || | || | |||| ||| Sbjct 34880 GGCCCGCGTGCGCGGGCCTTGGGTCCAAAAGGAGG--GGCAGCGCCCCGCCTCCGGCTCA 34937 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA----CGGCT 238 || ||||||||| |||| ||| ||||||||||||||||| ||||| | ||||| Sbjct 34938 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTCCGCCGGACGAGCCGGCT 34997 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34998 CCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 35057 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 35058 GGGTCTTCTTTCCCCGCTGATTTCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAT 35117 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35118 AGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 35177 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35178 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 35237 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 35238 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAGCATC 35294 >seq33548 Length=1432 Score = 495 bits (548), Expect = 1e-137 Identities = 282/287 (98%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 60 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 61 TCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGG 120 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 180 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 240 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 241 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 287 >seq15579 Length=10233 Score = 248 bits (274), Expect = 3e-63 Identities = 228/285 (80%), Gaps = 10/285 (4%) Strand=Plus/Plus Query 17 ACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGA 76 ||| ||||||| ||||||| |||| | ||||||||||||||||||| ||||||||| Sbjct 1704 ACACGAGATTTTTGTTCTCATTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGA 1763 Query 77 TGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGC--- 133 ||||| |||||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct 1764 TGTGCTGCCCCAGCCAAACTCCCCACCTAACAATGTCTTCCACTCGGATCGGCCCGCTTG 1823 Query 134 GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCATTGATTAAGT 192 || |||| || |||| | || | | || | |||| |||| || ||||| Sbjct 1824 TGTGGGCCTTGGGTCC--AAAAGGAGAGGCAACGCCCCGCCTCCGGCTCATGGAATAAGT 1881 Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC----GCCGAAACGGCTCCCACTTATT 248 |||| |||| ||| |||||| |||||||||| | | ||| |||||||||||||| Sbjct 1882 AAAATAACGTTAAAAGTAGTGATATTTCACTTTCGTCGGACGAGTCGGCTCCCACTTATC 1941 Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1942 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 1986 >seq4469 Length=32261 Score = 215 bits (238), Expect = 2e-53 Identities = 148/166 (89%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||||||||||| || ||||||| |||||||||| ||| ||||||||||||||| | Sbjct 29541 GTAGATAGGGACAATGAGAATCTCATTAATCCATTAATGTA--TCACTAATTAGATGATG 29598 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||| |||| |||||||||||||||||||||| |||||||||| | ||||||||| Sbjct 29599 AGGCATTTGACTACTTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCAGTGCTTGGTTG 29658 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct 29659 AATTTCTTTGCTTTGACATTCAGATCACTGGGTAGAAATCACATTG 29704 >seq1740 Length=51228 Score = 199 bits (220), Expect = 1e-48 Identities = 165/198 (83%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 314 GCTGATTCCGCCAAGCCCGT--TCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 371 ||||| | || |||||| || |||||||| |||||||||| | ||||||||| | |||| Sbjct 47575 GCTGAATTCGTCAAGCCAGTGTTCCCTTGGGTGTGGTTTCGTTGGATAGTAGACAAGGAC 47516 Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 | | ||||||| ||||||||||||||| || ||||||||||||||||||| ||| |||| Sbjct 47515 ATTCGGAATCTTGTTAATCCATTCATGTGCATCACTAATTAGATGACGAGCTATTGGGCT 47456 Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-GGTTGAATTTCTTCAC 490 | |||||||||||||||| ||| | || | ||||| | ||| ||||||||||||||| Sbjct 47455 ATCTTAAGAGAGTCATAGATACCCTTGCTATATACCCACACTTAGGTTGAATTTCTTCA- 47397 Query 491 TTTGACATTCAGAGCACT 508 |||||||||| |||||| Sbjct 47396 -TTGACATTCATAGCACT 47380 >seq1444 Length=57038 Score = 179 bits (198), Expect = 1e-42 Identities = 174/221 (79%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 4522 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 4463 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4462 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 4403 Query 127 GGCCCGCG---AAGGACCTTAACGCCAGAA-AATGGTCGGTGAAGACCAGTTCCGCTTCA 182 |||||||| || |||| ||| || | || | | | || |||| ||| Sbjct 4402 GGCCCGCGTGCGCGGGCCTTGGGTCCAAAAGGAGGGGCAGCG--CCCCGCCTCCGGCTCA 4345 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT 223 || ||||||||| |||| ||| |||||||||||||||| Sbjct 4344 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACT 4304 >seq118 Length=116217 Score = 149 bits (164), Expect = 2e-33 Identities = 103/117 (88%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 74795 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 74736 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGG 123 |||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 74735 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGG 74679 >seq7389 Length=26833 Score = 127 bits (140), Expect = 7e-27 Identities = 193/270 (71%), Gaps = 21/270 (8%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| | |||| ||||||| |||| | |||||||||||| ||||| Sbjct 25481 CTTTTGTTCCACACAAAATTTTTGTTCTCATTGAGCTCATCTTAGGACACCTATGTTATC 25422 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| || ||||||| |||||||||||||||||||||| | | ||||||| Sbjct 25421 TTTTA------GTATCGCCCCAACCAAACTCCCCACCTGACAATG-CTTTCGTCCGGATC 25369 Query 127 GGCCCGC----GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA--CCAGTTCCGCTT 180 | ||||| | ||| |||| || ||| || || || | || |||| | Sbjct 25368 GACCCGCTTGTGCAGG-CCTTGGGTCC---AAAAGGAGGGACAACACCCCGCCTCCGGCT 25313 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC----GCCGAAACGG 236 || || ||||||||| || | ||| ||||||||||||||||| | | ||| ||| Sbjct 25312 CACGGAATAAGTAAAATAATGTTAAAAGTAGTGGTATTTCACTTTCACCGGACGAGCCGG 25253 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCAT 266 ||||| |||| |||||||||||||||||| Sbjct 25252 CTCCCGATTATCCTACACCTCTCAAGTCAT 25223 >seq18055 Length=7862 Score = 86.0 bits (94), Expect = 2e-14 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 47 >seq5553 Length=28122 Score = 82.4 bits (90), Expect = 2e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 260 AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 319 || ||| |||||||||||| ||||||||| |||||||||||||| ||||||| | ||| | Sbjct 5495 AACTCAATTCACAAAGTCGCACTAGAGTCGAGCTCAACAGGGTCCTCTTTCCACTCTGGT 5554 Query 320 TCCGCCAAGC 329 | | |||||| Sbjct 5555 TTCACCAAGC 5564 >seq2 Length=225651 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 50349 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 50290 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 50289 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 50244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634541243328