Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2 201 4e-49 seq297 192 2e-46 seq5036 138 4e-30 seq2783 129 2e-27 seq2312 116 1e-23 seq15061 107 7e-21 seq19325 93.3 1e-16 seq17591 89.7 2e-15 seq21803 78.8 3e-12 seq37360 75.2 4e-11 >seq2 Length=225651 Score = 201 bits (222), Expect = 4e-49 Identities = 388/570 (68%), Gaps = 42/570 (7%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | | || | | Sbjct 50707 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 50650 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 50649 AAC--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 50593 Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175 ||||||||||||| ||| |||||| | ||| || || || | |||||| | Sbjct 50592 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 50533 Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235 ||| | |||||||| ||||| | | || | | ||| | || | Sbjct 50532 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 50482 Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 |||||||||||||||||| | | || || | | |||||||||| ||| Sbjct 50481 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 50428 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | ||||||||| |||| |||| | | ||||||| || | | |||||| Sbjct 50427 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 50368 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||| Sbjct 50367 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 50308 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 || |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| Sbjct 50307 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 50248 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| ||| || | ||||| | |||| ||||||||| Sbjct 50247 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 50204 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| ||||| | ||||| ||| Sbjct 50203 CACCGGGCAGGTGTCAGACTCTATACATCG 50174 >seq297 Length=119073 Score = 192 bits (212), Expect = 2e-46 Identities = 391/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 75999 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 75940 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 75939 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 75881 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 75880 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 75821 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 75820 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT--T 75764 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 75763 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 75706 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 75705 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 75646 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 75645 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 75587 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 75586 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 75527 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | || || | || || | | |||| | ||| ||||| Sbjct 75526 CGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 75473 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 75472 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 75443 >seq5036 Length=29953 Score = 138 bits (152), Expect = 4e-30 Identities = 146/191 (76%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 282 AAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTAC 340 |||||||||| ||||| | ||||||||| |||| || | | | |||||||| || Sbjct 1328 AAGCTATAGTCAAGGTGCACGGGGTCTTACCGTCTAGCTGTTGGTACTCAGCATCTTCAC 1269 Query 341 TCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCG 400 | | ||||||||||| | | || ||||||| ||| ||||||||| ||||||| Sbjct 1268 GGAGAATTCAATTTCACCGAGTCCATGTCGAAGACAGCGGGGCAGTCGTTACACCATTCG 1209 Query 401 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCAC 460 ||||||||| ||||| |||||||||||||| ||| |||||| |||| |||||| | Sbjct 1208 TGCAGGTCGCTACTTATGCGACAAGGAATTTCACTATCTTAGGGCAGTTAGAGTTACTGC 1149 Query 461 CGCCGTTTACT 471 ||||||||||| Sbjct 1148 CGCCGTTTACT 1138 >seq2783 Length=41469 Score = 129 bits (142), Expect = 2e-27 Identities = 97/114 (85%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||||| ||| ||||||||| ||||||||||| |||| ||||| ||| |||||||| Sbjct 26957 GAGACAGCGGGGCAGTCGTTACACCATTCGTGCAAGTCGCTACTTATGCGATAAGGAATT 26898 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTA 484 |||||||||||||| ||| |||||| | |||| |||||||||||||| |||| Sbjct 26897 TCGCTACCTTAGGACAATTAGAGTTACTATCGCCATTTACTGGGGCTTCCATTA 26844 Score = 100 bits (110), Expect = 1e-18 Identities = 125/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||||||||||| | | || || | | |||||||||| ||||| | Sbjct 28498 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAGGTGCA 28439 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| |||| |||| | | ||||||| || | | ||||||||||| Sbjct 28438 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 28379 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 || | || |||||||| ||| ||||||||| |||||||||||||||| Sbjct 28378 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCG 28329 >seq2312 Length=44952 Score = 116 bits (128), Expect = 1e-23 Identities = 88/104 (85%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| |||||||||||||||| ||||| | ||||||||||||||||||| Sbjct 25830 GGGCAGTCGTTACACCATTCGTGCAGGTCGTTACTTATGCAACAAGGAATTTCGCTACCT 25889 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||| |||| |||||| |||||||||| ||||||| ||| Sbjct 25890 TAGGACAGTTAGAGTTACTGTCGCCGTTTACCAGGGCTTCCATT 25933 >seq15061 Length=10779 Score = 107 bits (118), Expect = 7e-21 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410 ||||||| | |||| || ||||||| | ||||||| || ||| ||||||||| Sbjct 2805 ATTTCACTGAGCCTATGTCCGAGACAGTACCCAGATCGTTACACCTTTCATGCAGGTCGA 2864 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 ||||||| |||||||||||| |||||| |||||| |||||| ||| |||||| || || Sbjct 2865 AACTTACACGACAAGGAATTCCGCTACTTTAGGACCATTATAGCTACGACCGCCATTCAC 2924 Query 471 TGGGGCTTC 479 |||||||| Sbjct 2925 CGGGGCTTC 2933 >seq19325 Length=11105 Score = 93.3 bits (102), Expect = 1e-16 Identities = 313/478 (65%), Gaps = 16/478 (3%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCC-TTGTGCACTTACACTCACCACCTGATT-GCCAACCAGGCTG 70 ||| |||||||||||||| || ||| || |||||| || ||| ||| || | | | Sbjct 5648 TCTTGCAGTCAAGCTCCCTTTTTGCCTTTGCACTCAAGGCC--ATTCTCCATCCGGCCCG 5591 Query 71 AGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACC 130 ||| |||||||| |||||| |||| |||||||||| | | |||||| ||||||| | Sbjct 5590 AGGAAACCTTTGCATGCCTCCTTTACCTTTTGGGAGGCCTA-TGCCCCATATAAACTATC 5532 Query 131 CACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATCCACTACGGTC 187 ||| | ||| |||| || || | || || ||||||| | | | | Sbjct 5531 TACCTGAGACTATCCCTTGGCCCAAAGGTTCTGATACAGGGTTAGAATTGTAGCTCTTCC 5472 Query 188 AGAGTGGTATTTCAACAACGACTC-CACAACCACTAGCGTGGCCGCATCATAGTCTCCCA 246 | | |||||| ||| | | ||| | | |||| | | || | | || ||| Sbjct 5471 ATAATGGTATCTCATTGATGGCTCGGGCCCTCGGAAGCGAG---CCTTCTTCGCCTTCCA 5415 Query 247 CCTATCCTAC--ACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGG 304 |||| | | | || | || || |||||| ||||| | ||| ||| | | | Sbjct 5414 CCTAAGTTGCGTAGGAAAGG--CCTAAAGCCAATTCCAAGGAACAGTAAAGTTTCATAGT 5357 Query 305 TCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCT 364 |||| |||| || | | |||| ||||| | | |||||||| |||| Sbjct 5356 GCTTTATGTCCATGTGCAGGTAGTCCGCATATTTACAGACATGTCTATTTCACCAAGCCT 5297 Query 365 GTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 424 | |||||| | |||||| || ||||||| ||||| ||||||||| |||| Sbjct 5296 CTATATGAGACGGTGCCCATATCGTTATGCTTTTCGTGCGGGTCGAAACTTACCCAACAA 5237 Query 425 GGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 | |||||||||| ||||||| ||||||||| ||||||||| | ||||||||| || Sbjct 5236 GAAATTTCGCTATCTTAGGACCATTATAGTTATGACCGCCGTTCATTGGGGCTTCGAT 5179 >seq17591 Length=8274 Score = 89.7 bits (98), Expect = 2e-15 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| ||| ||||||||| ||||||||||| ||| |||||||||| ||||||| Sbjct 953 TCATTACGCCTTTCATGCAGGTCGAAACTTACCCGATAAGAAATTTCGCTATCTTAGGAA 894 Query 446 GGTTATAGTTACCA 459 |||||||||||| Sbjct 893 ATTTATAGTTACCA 880 >seq21803 Length=7378 Score = 78.8 bits (86), Expect = 3e-12 Identities = 141/204 (69%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| ||||||||||||||| ||| || ||||| | || || Sbjct 1249 TCGACGGGTGGGTCTTCCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 1308 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | | |||| |||||||| || ||||||||| |||||||||| | | | ||||| Sbjct 1309 ATTCGGCCCGAGGAAACCTTTGCACGTCTCCGTTACCTTTTGGGAGGCCTA-CACCCCAT 1367 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 |||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 1368 AGAAACTATCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 1427 Query 178 CACTACGGTCAGAGTGGTATTTCA 201 | | ||||||||||| ||| Sbjct 1428 TAGCTCTTCCAGAGTGGTATCTCA 1451 >seq37360 Length=1158 Score = 75.2 bits (82), Expect = 4e-11 Identities = 105/146 (72%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| ||||||||||||||| ||| || ||||| | || || Sbjct 732 TCGACGGGTGGGTCTTCCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 673 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | | |||| |||||||| || ||||||||| |||||||||| | | | ||||| Sbjct 672 ATTCGGCCCGAGGAAACCTTTGCACGTCTCCGTTACCTTTTGGGAGGCCTA-CACCCCAT 614 Query 121 TTAAACTACCCACCAGGCACTGTCCC 146 |||||| | ||| | |||||||| Sbjct 613 AGAAACTATCTACCTGAGACTGTCCC 588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701714171136