Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02]
40,286 sequences; 571,388,321 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq32078 123 2e-23
seq7765 123 2e-23
seq2510 114 1e-20
seq2656 105 5e-18
>seq32078
Length=1569
Score = 123 bits (136), Expect = 2e-23
Identities = 470/725 (65%), Gaps = 16/725 (2%)
Strand=Plus/Plus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | || ||| |
Sbjct 724 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 783
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| |||||||| | ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct 784 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 843
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391
||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | ||
Sbjct 844 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 902
Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450
|| | ||| || ||||| | || || ||| | | ||| || || |||||
Sbjct 903 GCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGA-AAGAAGGCCGACTGGGCTC 961
Query 61451 TCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509
| |||||| ||| || | ||| | |||| || || | | || |||||
Sbjct 962 TGCGTTGGATCCACTCGTCGA---GCT-CCTTTGCCGAGCGCATCGTCGCCTTTGCCTGC 1017
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
||||||||| | || ||| || || ||| | | ||||| ||| | ||||| || ||
Sbjct 1018 GTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGC 1077
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||| || || |||||| ||| ||| | || || || |||||||| | || ||
Sbjct 1078 CTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACTGC 1137
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689
|| || || | || || | || ||| || | | ||||| |||
Sbjct 1138 GACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTG 1194
Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749
|| || || || || |||||||| |||||| || |||||| |||||
Sbjct 1195 AAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA 1254
Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809
|| |||| | |||||||| | | || ||| ||||| |||||||| || ||||||
Sbjct 1255 GTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGAC 1314
Query 61810 CGTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATT 61867
|| || || | | | |||| || ||| ||| ||| | || || ||||| |
Sbjct 1315 CGGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACT 1372
Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927
||||| | || ||| || | || || || ||||| || |||||| | || ||||| |
Sbjct 1373 GGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATT 1432
Query 61928 ATCAA 61932
| |||
Sbjct 1433 ACCAA 1437
>seq7765
Length=42474
Score = 123 bits (136), Expect = 2e-23
Identities = 470/725 (65%), Gaps = 16/725 (2%)
Strand=Plus/Minus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | || ||| |
Sbjct 40459 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 40400
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| |||||||| | ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct 40399 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 40340
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391
||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | ||
Sbjct 40339 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 40281
Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450
|| | ||| || ||||| | || || ||| | | ||| || || |||||
Sbjct 40280 GCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGA-AAGAAGGCCGACTGGGCTC 40222
Query 61451 TCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509
| |||||| ||| || | ||| | |||| || || | | || |||||
Sbjct 40221 TGCGTTGGATCCACTCGTCGA---GCT-CCTTTGCCGAGCGCATCGTCGCCTTTGCCTGC 40166
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
||||||||| | || ||| || || ||| | | ||||| ||| | ||||| || ||
Sbjct 40165 GTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGC 40106
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||| || || |||||| ||| ||| | || || || |||||||| | || ||
Sbjct 40105 CTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCACTGC 40046
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689
|| || || | || || | || ||| || | | ||||| |||
Sbjct 40045 GACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTG 39989
Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749
|| || || || || |||||||| |||||| || |||||| |||||
Sbjct 39988 AAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA 39929
Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809
|| |||| | |||||||| | | || ||| ||||| |||||||| || ||||||
Sbjct 39928 GTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGAC 39869
Query 61810 CGTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATT 61867
|| || || | | | |||| || ||| ||| ||| | || || ||||| |
Sbjct 39868 CGGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACT 39811
Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927
||||| | || ||| || | || || || ||||| || |||||| | || ||||| |
Sbjct 39810 GGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATT 39751
Query 61928 ATCAA 61932
| |||
Sbjct 39750 ACCAA 39746
>seq2510
Length=43382
Score = 114 bits (126), Expect = 1e-20
Identities = 467/724 (65%), Gaps = 14/724 (2%)
Strand=Plus/Plus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | || ||| |
Sbjct 20818 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 20877
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| |||||||| | ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct 20878 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 20937
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391
||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | ||
Sbjct 20938 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 20996
Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450
|| | ||| || ||||||| || || ||| | | ||| || || |||||
Sbjct 20997 GCGCCTCTTCCGCGCGATCGAGACCGTCCCCTGCGTCGGA-AAGAAGGCCGAGTGGGCGC 21055
Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510
| |||||| ||| | | || | | |||| || || | | || ||||| |
Sbjct 21056 TGCGTTGGAT--CCACT-CGTCGAGTTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCG 21112
Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570
|||||||| | || ||| || || || | | ||||| ||| | ||||| || || |
Sbjct 21113 TCGAGGGTATCTTCTTCTCCGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCC 21172
Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630
| ||||| || || |||||| ||| ||| | || || || |||||||| | || || |
Sbjct 21173 TCATGCCTGGGCTAACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCACTGCG 21232
Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690
| || || | || || | || ||| || | | ||||| |||
Sbjct 21233 ACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTGA 21289
Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750
|| || || || || |||||||| |||||| || |||||| ||||| |
Sbjct 21290 AGTCTATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCAG 21349
Query 61751 TCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACC 61810
| |||| | || ||||| | | || ||| ||||| |||||||| || || ||||
Sbjct 21350 TTGCACTGGTGGGTATGAACGGGGTTCTGATGAGTCAGTACATTGAATTCGTCGCGGACC 21409
Query 61811 GTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATTT 61868
| || || | | | |||| || ||| ||| ||| | || || ||||| |
Sbjct 21410 GGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACTG 21467
Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928
||||| | || ||| || | || || || ||||| || |||||| | || ||||| ||
Sbjct 21468 GATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTA 21527
Query 61929 TCAA 61932
|||
Sbjct 21528 CCAA 21531
Score = 93.3 bits (102), Expect = 3e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| |||||| ||||| | | || ||| |
Sbjct 20069 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 20128
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| |||||||| | ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct 20129 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 20188
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
||||| ||||||||| | ||| |||| || ||||||| |||
Sbjct 20189 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGA 20232
>seq2656
Length=42395
Score = 105 bits (116), Expect = 5e-18
Identities = 285/431 (66%), Gaps = 15/431 (3%)
Strand=Plus/Minus
Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272
|| ||||| ||||| || ||||| ||||| ||||| | | || ||| | |
Sbjct 42090 GCCTTCTTCGCCGCCTCCGACGGCATCGTTCTCGAGAACCTCGCCGCCCGGTTCATGAAC 42031
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| ||||| | |||||||||| |||||||| |||||||||||||| ||||| ||
Sbjct 42030 GACGTGCAGCTCCCGGAGGCGCGCGCCTTCTACGGGTTCCAGATTGCCATCGAGAACATC 41971
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392
||||| ||||||||| | ||| |||| | || |||| ||| | || ||| |||
Sbjct 41970 CACTCCGAGATGTACTCCCTCCTCCTCGAGTCTTATATCAAGGACCCGG----ACGAGAA 41915
Query 61393 ----CGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGC-GGAAAGCGGATTGG 61446
|| | ||| || ||||||| || || ||| | || ||| || || |||
Sbjct 41914 GACCCGCCTCTTCCGGGCGATCGAGACCGTCCCCTGCGTCG--GCAAGAAGGCCGACTGG 41857
Query 61447 GCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCG 61506
|| || ||||| | || | ||| | | | | || || | | || || ||
Sbjct 41856 GCGGTCCGCTGGAT---CCGTTCGTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCC 41800
Query 61507 GTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGT 61566
||||| || | || ||| || || || ||||||||| ||| | ||||| ||
Sbjct 41799 TGCGTCGAAGGCATCTTCTTCTCCGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGC 41740
Query 61567 GGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCAT 61626
||||| ||||| || || || ||| ||| ||| | || || |||||||||||| | ||
Sbjct 41739 GGACTCATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCAC 41680
Query 61627 TGTGATTTTGC 61637
|| || || ||
Sbjct 41679 TGCGACTTCGC 41669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397372799827040
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