Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq32078 123 2e-23 seq7765 123 2e-23 seq2510 114 1e-20 seq2656 105 5e-18 >seq32078 Length=1569 Score = 123 bits (136), Expect = 2e-23 Identities = 470/725 (65%), Gaps = 16/725 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| |||||| ||||| | | || ||| | Sbjct 724 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 783 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || |||||||| | ||||| || ||||||||||||||||| ||||| ||||| || Sbjct 784 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 843 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391 ||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | || Sbjct 844 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 902 Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || | ||| || ||||| | || || ||| | | ||| || || ||||| Sbjct 903 GCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGA-AAGAAGGCCGACTGGGCTC 961 Query 61451 TCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 | |||||| ||| || | ||| | |||| || || | | || ||||| Sbjct 962 TGCGTTGGATCCACTCGTCGA---GCT-CCTTTGCCGAGCGCATCGTCGCCTTTGCCTGC 1017 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||| || || ||| | | ||||| ||| | ||||| || || Sbjct 1018 GTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGC 1077 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || || |||||| ||| ||| | || || || |||||||| | || || Sbjct 1078 CTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACTGC 1137 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || || | || || | || ||| || | | ||||| ||| Sbjct 1138 GACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTG 1194 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 || || || || || |||||||| |||||| || |||||| ||||| Sbjct 1195 AAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA 1254 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 || |||| | |||||||| | | || ||| ||||| |||||||| || |||||| Sbjct 1255 GTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGAC 1314 Query 61810 CGTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATT 61867 || || || | | | |||| || ||| ||| ||| | || || ||||| | Sbjct 1315 CGGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACT 1372 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||| | || ||| || | || || || ||||| || |||||| | || ||||| | Sbjct 1373 GGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATT 1432 Query 61928 ATCAA 61932 | ||| Sbjct 1433 ACCAA 1437 >seq7765 Length=42474 Score = 123 bits (136), Expect = 2e-23 Identities = 470/725 (65%), Gaps = 16/725 (2%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| |||||| ||||| | | || ||| | Sbjct 40459 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 40400 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || |||||||| | ||||| || ||||||||||||||||| ||||| ||||| || Sbjct 40399 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 40340 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391 ||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | || Sbjct 40339 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 40281 Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || | ||| || ||||| | || || ||| | | ||| || || ||||| Sbjct 40280 GCGCCTCTTCCGCGCGATCGAAACCGTCCCCTGCGTCGGA-AAGAAGGCCGACTGGGCTC 40222 Query 61451 TCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 | |||||| ||| || | ||| | |||| || || | | || ||||| Sbjct 40221 TGCGTTGGATCCACTCGTCGA---GCT-CCTTTGCCGAGCGCATCGTCGCCTTTGCCTGC 40166 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||| | || ||| || || ||| | | ||||| ||| | ||||| || || Sbjct 40165 GTCGAGGGTATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTCAAGAAGCGGGGC 40106 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || || |||||| ||| ||| | || || || |||||||| | || || Sbjct 40105 CTCATGCCTGGGCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCACTGC 40046 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || || | || || | || ||| || | | ||||| ||| Sbjct 40045 GACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTG 39989 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 || || || || || |||||||| |||||| || |||||| ||||| Sbjct 39988 AAGTCCATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCA 39929 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 || |||| | |||||||| | | || ||| ||||| |||||||| || |||||| Sbjct 39928 GTTGCACTGGTGGGCATGAACGGGGTTCTGATGAGCCAGTACATTGAATTCGTGGCCGAC 39869 Query 61810 CGTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATT 61867 || || || | | | |||| || ||| ||| ||| | || || ||||| | Sbjct 39868 CGGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACT 39811 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||| | || ||| || | || || || ||||| || |||||| | || ||||| | Sbjct 39810 GGATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATT 39751 Query 61928 ATCAA 61932 | ||| Sbjct 39750 ACCAA 39746 >seq2510 Length=43382 Score = 114 bits (126), Expect = 1e-20 Identities = 467/724 (65%), Gaps = 14/724 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| |||||| ||||| | | || ||| | Sbjct 20818 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 20877 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || |||||||| | ||||| || ||||||||||||||||| ||||| ||||| || Sbjct 20878 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 20937 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA-ACGTGA 61391 ||||| ||||||||| | ||| |||| || ||||||| ||| | ||| | || Sbjct 20938 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGACTCCGAGGAGAAGT-C 20996 Query 61392 ACGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || | ||| || ||||||| || || ||| | | ||| || || ||||| Sbjct 20997 GCGCCTCTTCCGCGCGATCGAGACCGTCCCCTGCGTCGGA-AAGAAGGCCGAGTGGGCGC 21055 Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | |||||| ||| | | || | | |||| || || | | || ||||| | Sbjct 21056 TGCGTTGGAT--CCACT-CGTCGAGTTCCTTTGCCGAGCGCATCGTCGCCTTTGCCTGCG 21112 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 |||||||| | || ||| || || || | | ||||| ||| | ||||| || || | Sbjct 21113 TCGAGGGTATCTTCTTCTCCGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGAGGCC 21172 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| || || |||||| ||| ||| | || || || |||||||| | || || | Sbjct 21173 TCATGCCTGGGCTAACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGACTCCACTGCG 21232 Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || || | || || | || ||| || | | ||||| ||| Sbjct 21233 ACTTCGC---CTGCCTCCTCTACAGCCTCCTGAACAACAAATTGCCCGAGGAAAAAGTGA 21289 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 || || || || || |||||||| |||||| || |||||| ||||| | Sbjct 21290 AGTCTATCGTGGAAGACGCCGTCGATATCGAACGGGAATTCGTGTGTGACGCGTTGCCAG 21349 Query 61751 TCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACC 61810 | |||| | || ||||| | | || ||| ||||| |||||||| || || |||| Sbjct 21350 TTGCACTGGTGGGTATGAACGGGGTTCTGATGAGTCAGTACATTGAATTCGTCGCGGACC 21409 Query 61811 GTCTGTTGGTCGAT-TTGGGTATGAAGC-GGATCTATAATACGAAAAACCCATTTGATTT 61868 | || || | | | |||| || ||| ||| ||| | || || ||||| | Sbjct 21410 GGTTGATGATGGCTCTTGGCTA--CAGCAAGATTTATGGCGTCACGAATCCTTTTGACTG 21467 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 ||||| | || ||| || | || || || ||||| || |||||| | || ||||| || Sbjct 21468 GATGGAGCTCATCTCGTTGCAGGGGAAAACTAATTTCTTTGAGAAAAGAGTCGGCGATTA 21527 Query 61929 TCAA 61932 ||| Sbjct 21528 CCAA 21531 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| |||||| ||||| | | || ||| | Sbjct 20069 GCCTTCTTCGCCGCGTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGCTTCATGTCC 20128 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || |||||||| | ||||| || ||||||||||||||||| ||||| ||||| || Sbjct 20129 GACGTGCAAGTCCCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 20188 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||| ||||||||| | ||| |||| || ||||||| ||| Sbjct 20189 CACTCCGAGATGTACTCCCTCCTCCTCGAGACCTACATCAAGGA 20232 >seq2656 Length=42395 Score = 105 bits (116), Expect = 5e-18 Identities = 285/431 (66%), Gaps = 15/431 (3%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| ||||| ||||| | | || ||| | | Sbjct 42090 GCCTTCTTCGCCGCCTCCGACGGCATCGTTCTCGAGAACCTCGCCGCCCGGTTCATGAAC 42031 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || ||||| | |||||||||| |||||||| |||||||||||||| ||||| || Sbjct 42030 GACGTGCAGCTCCCGGAGGCGCGCGCCTTCTACGGGTTCCAGATTGCCATCGAGAACATC 41971 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 ||||| ||||||||| | ||| |||| | || |||| ||| | || ||| ||| Sbjct 41970 CACTCCGAGATGTACTCCCTCCTCCTCGAGTCTTATATCAAGGACCCGG----ACGAGAA 41915 Query 61393 ----CGATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGC-GGAAAGCGGATTGG 61446 || | ||| || ||||||| || || ||| | || ||| || || ||| Sbjct 41914 GACCCGCCTCTTCCGGGCGATCGAGACCGTCCCCTGCGTCG--GCAAGAAGGCCGACTGG 41857 Query 61447 GCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCG 61506 || || ||||| | || | ||| | | | | || || | | || || || Sbjct 41856 GCGGTCCGCTGGAT---CCGTTCGTCGGATTCCTACGCCGAGCGCCTCGTTGCCTTCGCC 41800 Query 61507 GTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGT 61566 ||||| || | || ||| || || || ||||||||| ||| | ||||| || Sbjct 41799 TGCGTCGAAGGCATCTTCTTCTCCGGCTCCTTCTGCGCAATCTTCTGGCTCAAGAAGCGC 41740 Query 61567 GGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCAT 61626 ||||| ||||| || || || ||| ||| ||| | || || |||||||||||| | || Sbjct 41739 GGACTCATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTCCAC 41680 Query 61627 TGTGATTTTGC 61637 || || || || Sbjct 41679 TGCGACTTCGC 41669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397372799827040