Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eichhornia_20paniculata_20[genbank_20GCA_5F001647135.1_202016-05-02] 40,286 sequences; 571,388,321 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq33684 105 9e-18 seq941 105 9e-18 >seq33684 Length=1421 Score = 105 bits (116), Expect = 9e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 162622 CTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGA 162681 || ||||| ||||| ||| | ||| | ||||||| |||||||| ||||||||| ||| Sbjct 667 CTCTTCAACCACGAGAGCCCCCGCCGGGGAGAGAACTTCGTCACCCGCAAGATCACCCGC 608 Query 162682 GCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGA--TCTACAACTTGGAAACCTCAATG 162739 ||| | ||| || | || || ||||| | | ||||| || || ||||| | Sbjct 607 GCCGTCGGCCGCATCAAGGTCGGCCTCCAGACCAAGGTCTAC--CTGGGCAACCTTTCGG 550 Query 162740 CCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGC 162799 | || |||||||| |||| ||||||||| |||||||||||| | ||||| |||| Sbjct 549 CGGCCCGCGACTGGGGGTTCGCCGGAGACTACGTGGAGGCTATGTGGCTCATGCTGCAGC 490 Query 162800 AAGAGAAGCCAGATGATTATGTGATCGCAAC 162830 | || ||||| | ||||| ||| | || || Sbjct 489 AGGACAAGCCCGGCGATTACGTGGTGGCCAC 459 >seq941 Length=65995 Score = 105 bits (116), Expect = 9e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 162622 CTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGA 162681 || ||||| ||||| ||| | ||| | ||||||| |||||||| ||||||||| ||| Sbjct 16617 CTCTTCAACCACGAGAGCCCCCGCCGGGGAGAGAACTTCGTCACCCGCAAGATCACCCGC 16558 Query 162682 GCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGA--TCTACAACTTGGAAACCTCAATG 162739 ||| | ||| || | || || ||||| | | ||||| || || ||||| | Sbjct 16557 GCCGTCGGCCGCATCAAGGTCGGCCTCCAGACCAAGGTCTAC--CTGGGCAACCTTTCGG 16500 Query 162740 CCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGC 162799 | || |||||||| |||| ||||||||| |||||||||||| | ||||| |||| Sbjct 16499 CGGCCCGCGACTGGGGGTTCGCCGGAGACTACGTGGAGGCTATGTGGCTCATGCTGCAGC 16440 Query 162800 AAGAGAAGCCAGATGATTATGTGATCGCAAC 162830 | || ||||| | ||||| ||| | || || Sbjct 16439 AGGACAAGCCCGGCGATTACGTGGTGGCCAC 16409 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 162622 CTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGA 162681 || ||||||||||| ||| | ||| | || || | |||||||| ||||||||| ||| Sbjct 13440 CTCTTCAATCACGAGAGCCCTCGCCGCGGGGAAAACTTCGTCACGCGCAAGATCACCCGC 13499 Query 162682 GCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCC 162741 ||| | ||| || | || || || || | | || || || |||||| || Sbjct 13500 GCCGTCGGCCGCATCAAGGTCGGGCTGCAGACCAAGCTCTTCCTGGGCAACCTCTCGGCG 13559 Query 162742 CGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAA 162801 || |||||||| |||| |||||||| ||||| |||||| | ||||| ||||| Sbjct 13560 GCGCGAGACTGGGGGTTCGCCGGGGACTACGTGGAGGCCATGTGGCTTATGCTGCAGCAG 13619 Query 162802 GAGAAGCCAGATGATTATGTG 162822 ||| |||| | || || ||| Sbjct 13620 GAGCAGCCCGGCGACTACGTG 13640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691110998433360