Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq40061 102 2e-19
>seq40061
Length=156973
Score = 102 bits (112), Expect = 2e-19
Identities = 213/310 (69%), Gaps = 8/310 (3%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69
|||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| |
Sbjct 106769 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 106827
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 106828 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 106886
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| | ||| ||||| || ||||||||| ||| | ||||||| || ||
Sbjct 106887 GGAACCCA--CCGG-AGCCGCAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 106942
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 106943 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 107002
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| |||||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 107003 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 107062
Query 310 CCAATCAAAC 319
||| || |||
Sbjct 107063 CCACTCGAAC 107072
Score = 102 bits (112), Expect = 2e-19
Identities = 213/310 (69%), Gaps = 8/310 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69
|||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| |
Sbjct 135397 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 135339
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 135338 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 135280
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| | ||| ||||| || ||||||||| ||| | ||||||| || ||
Sbjct 135279 GGAACCCA--CCGG-AGCCGCAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 135224
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 135223 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 135164
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| |||||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 135163 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 135104
Query 310 CCAATCAAAC 319
||| || |||
Sbjct 135103 CCACTCGAAC 135094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972410286592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |