Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq40061 102 2e-19 >seq40061 Length=156973 Score = 102 bits (112), Expect = 2e-19 Identities = 213/310 (69%), Gaps = 8/310 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69 |||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| | Sbjct 106769 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 106827 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 106828 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 106886 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | ||||||| || || Sbjct 106887 GGAACCCA--CCGG-AGCCGCAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 106942 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 106943 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 107002 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 107003 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 107062 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 107063 CCACTCGAAC 107072 Score = 102 bits (112), Expect = 2e-19 Identities = 213/310 (69%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69 |||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| | Sbjct 135397 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 135339 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 135338 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 135280 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | ||||||| || || Sbjct 135279 GGAACCCA--CCGG-AGCCGCAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 135224 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 135223 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 135164 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 135163 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 135104 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 135103 CCACTCGAAC 135094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972410286592