Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq40061 93.3 4e-17
seq15 75.2 1e-11
>seq40061
Length=156973
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 107966 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 108023
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 108024 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 108073
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 134200 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 134143
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 134142 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 134093
>seq15
Length=24314465
Score = 75.2 bits (82), Expect = 1e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTT-GAGTGAATCACGGTTAA 82
||||| |||||| || | || || ||||||| ||||| | ||| ||| || | | ||
Sbjct 8530587 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCATCGAGAGAACCATGTTGAA 8530528
Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
|||||| | |||| |||||||||||||| |||| || ||||
Sbjct 8530527 GGAACTCGACAAAATGACCCTGTAACTTTGGGAGAAGGGGT 8530487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530993846094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |