Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq40061 188 2e-45
seq8 132 2e-28
seq15 102 3e-19
seq2 102 3e-19
seq11 100 1e-18
seq6 100 1e-18
seq5 77.0 1e-11
>seq40061
Length=156973
Score = 188 bits (208), Expect = 2e-45
Identities = 397/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||||| ||| ||| | | |||||||| | |||||||| |||||
Sbjct 106913 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 106972
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 106973 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 107032
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 107033 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 107092
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 107093 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 107147
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287
|| ||| | | ||| ||||||| | |||||||| |||| |
Sbjct 107148 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 107205
Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336
| || | || | || |||||| ||||| | |||| | | | |
Sbjct 107206 CCCCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 107265
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | ||
Sbjct 107266 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 107323
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||
Sbjct 107324 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 107382
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516
|||||||| |||||||| ||||| || ||| || || | |||| |||| |
Sbjct 107383 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 107441
Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558
|| ||||||| ||||||| | | ||| ||||||||||||||
Sbjct 107442 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 107483
Score = 188 bits (208), Expect = 2e-45
Identities = 397/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||||| ||| ||| | | |||||||| | |||||||| |||||
Sbjct 135253 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 135194
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || |||||||||||||| ||| |||||||| |||
Sbjct 135193 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 135134
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 135133 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 135074
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 135073 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 135019
Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287
|| ||| | | ||| ||||||| | |||||||| |||| |
Sbjct 135018 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 134961
Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336
| || | || | || |||||| ||||| | |||| | | | |
Sbjct 134960 CCCCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 134901
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | ||
Sbjct 134900 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 134843
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||||| |||| ||| || | |||||||||| | || |||||
Sbjct 134842 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 134784
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516
|||||||| |||||||| ||||| || ||| || || | |||| |||| |
Sbjct 134783 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 134725
Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558
|| ||||||| ||||||| | | ||| ||||||||||||||
Sbjct 134724 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 134683
>seq8
Length=40195399
Score = 132 bits (146), Expect = 2e-28
Identities = 315/471 (67%), Gaps = 35/471 (7%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94
|||||||| |||||||| ||||| ||||||||||| | ||| | || |||||
Sbjct 29095105 GACCCGAACTTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 29095164
Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154
|||| |||| ||| |||||||| ||| || ||||||| ||||| ||||||| ||| || |
Sbjct 29095165 GTCCAAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTAAAATGCCA 29095224
Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTA--T 212
|||| || |||||| ||||| |||||| || || | || || || |
Sbjct 29095225 CTAAAACCCAGAGCTAGCTGATTCTCCCCGAAATGCGTTGAG---GCGCAGCAGTTAACT 29095281
Query 213 CACCATC-GGGGGTAGAGCACTGTT---ATGGCTAGGGGGTCATTGCGACTTACCAAACC 268
| |||| |||||| ||||||||| ||| | | | | ||| |||||||
Sbjct 29095282 GAACATCTAGGGGTAAAGCACTGTTTCGATGCGAACCGCG--AGAGCG--GTACCAAATT 29095337
Query 269 ATTGCAAACTCCGAATGC--------GCATCAGTTTTACCGCGG-----------GAGTG 309
|||||||| ||| | | || | || | || ||||
Sbjct 29095338 GAGGCAAACTCTAAATACTAGATATGACCCCAAAATAACAGGGGTCAAGGTCGGCCAGTG 29095397
Query 310 AGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGC 369
|| ||||| | |||| | | | ||||||| || | || ||| | ||||||||||
Sbjct 29095398 AGACGATGGGAGATAAGCTTCATCGTCGAGAGGGAAACAGTCTGGATCACCAGCTAAGGC 29095457
Query 370 CCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTG 429
||| ||||||| ||| | | | | || || || | ||| ||||||| |||| |||
Sbjct 29095458 CCCTAAATGACCGCTCAATGATA--AAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTT 29095515
Query 430 GCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
|| | |||||||||| || || ||||||||||||| |||||||| |||||
Sbjct 29095516 GCCTAGAAGCAGCCACTC-TTGAAAGAGTGCGTAATAGCTCACTGATCGAG 29095565
>seq15
Length=24314465
Score = 102 bits (112), Expect = 3e-19
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 47 AGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCAC 106
||||||||| || || ||| |||||| | | | | || |||||||||||||| ||
Sbjct 21947242 AGTGATCTATCCGTGATCAGTATGAAGTTTGGATGAAACTAAGTGGAGGTCCGAACCGAC 21947183
Query 107 TAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGA 166
| |||||||| ||| | ||||||| |||| ||||| ||||| || | | ||| | ||
Sbjct 21947182 TGATGTTGAAGAATCAACGGATGAGTTGTGATTAGGGATGAAATGCCATTCGAACCTAGA 21947123
Query 167 AATAGCTGGTTCTCTCCGAAA 187
|||||||||||||||||||
Sbjct 21947122 GCTAGCTGGTTCTCTCCGAAA 21947102
>seq2
Length=65558141
Score = 102 bits (112), Expect = 3e-19
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94
||||| || | | |||||||| ||| | |||||||||| | ||| | || |||||
Sbjct 6513158 GACCCAAACCTAGGTGATCTATCCAAGATCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 6513099
Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154
||| ||| | ||| |||||||||||| || |||| | ||||| ||||||||||| || |
Sbjct 6513098 GTCTGAATCGACTGATGTTGAAAAATCAGTGGATACGTTGTGGTTAGGGGTGAAATGCCA 6513039
Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGT 198
| || || |||||||||||||| |||| | || ||||
Sbjct 6513038 CTCGAAACCAGAGCTAGCTGGTTCTCTCTGAAATATGTTGAGGT 6512995
>seq11
Length=30068910
Score = 100 bits (110), Expect = 1e-18
Identities = 162/226 (72%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396
|||||| || |||||||| || |||||||||||| |||| || ||| ||| | ||
Sbjct 14633174 GAGAGGGAAACAATCCGGATTACTAGCTAAGGCCCCTAAATAACTGCTCAGT--GATGAA 14633231
Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456
|| || | ||| ||||| | |||| || || | ||| ||||||||| || |||||
Sbjct 14633232 GGAGGTAGCAGTGCACAGACAACCAGGAGATTTGCCTAGAACCAGCCATTC-TTGAAAGA 14633290
Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTC-GGGCGTGGATAATAATCGGGTATTAAGTTG 515
|||| | | ||||||||| ||||| || | || | | ||| ||| ||||
Sbjct 14633291 GTGCATGATAGCTCACTAATCGAGTGCTCTTGTACTGAAGATGAATGGGG--CTAAGCGA 14633348
Query 516 TCTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGCAT 560
||||||||||| ||||||| | | ||| |||||||||| |||||
Sbjct 14633349 TCTACCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGAAGCAT 14633393
>seq6
Length=44357769
Score = 100 bits (110), Expect = 1e-18
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107
|||||||| ||||| |||||||||| | ||| | || |||||||||||||| |||
Sbjct 37292700 GTGATCTATCCATGATCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACT 37292759
Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155
|||||||| ||| || ||||||| ||||| ||||||||||| || ||
Sbjct 37292760 GATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCAA 37292807
>seq5
Length=51955539
Score = 77.0 bits (84), Expect = 1e-11
Identities = 122/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72
|||| || ||| ||| | | ||| |||| | |||||||| | ||| || ||||||
Sbjct 10406246 AGGGTGATTGTCACTGCTTATGGACTCGAATCTGGGTGATCTATCTATGATCAAGATGAA 10406305
Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132
| | ||| | || |||||||||||| | ||| |||||||| || || ||||||
Sbjct 10406306 GCTTGGGTGAAACTAAGTGGAGGTCCGAATCGACTGATGTTGAAGGATCAGCAGATGAGT 10406365
Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187
|| || ||| ||||||| || | | || ||| ||||| ||| || |||||
Sbjct 10406366 TGAGGTTAGAGGTGAAATGCCACTCGAATCCAGAACTAGCTAGTTTTCCTCGAAA 10406420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1688923129344
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