Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13]
40,061 sequences; 1,535,178,229 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2260 508 2e-141
seq2908 497 3e-138
seq1607 495 1e-137
seq7681 439 7e-121
seq5 367 4e-99
seq4607 327 3e-87
seq24894 230 7e-58
seq4453 230 7e-58
seq36652 228 2e-57
seq16486 221 4e-55
seq1766 217 4e-54
seq12 210 7e-52
seq4380 199 1e-48
seq1 197 4e-48
seq2879 188 2e-45
seq16 167 7e-39
seq13 131 5e-28
seq875 120 9e-25
seq1542 116 1e-23
seq18 93.3 1e-16
>seq2260
Length=73924
Score = 508 bits (562), Expect = 2e-141
Identities = 426/511 (83%), Gaps = 10/511 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| ||| | | ||||| |||| ||||||||||||||||||
Sbjct 6843 GTGCTCATTCCAATTACCGGACTCGAG-GAGCCTGGTATTGTTATTTATTGTCACTACCT 6901
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct 6902 CTCCGTGTCAGGATTGGGTAATTTGCACGCCTGCTGCTTTCCTTGGATGTGGTAGCCATT 6961
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||| |||| ||||||||||||||||| || | ||||||| |||||||||
Sbjct 6962 TCTCAGGCTCCC-CTCCAGAATCGAACCCTAATTCTCCATCACCCGTTACCACCATGGTA 7020
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||| |||||||||||||| ||||||||||||| | ||||| ||
Sbjct 7021 GGCCCCTATCCTACCATTGAAAGTTGATAGGGTAGAAATTTGAATGGTGCGTCGCCAGCA 7080
Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC-CCCGAAG--GGCG 295
|| || | |||||||||| |||||| |||||||| || || | | || || | |
Sbjct 7081 CATGGGTCGTGCGATTCGTCGAGTTATCATGAATCATCAGAGAATCGGGCGGAGCCCGTG 7140
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || |||||| ||||||||| ||| | ||| |||||||
Sbjct 7141 TCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGATTTGTTGCACGTATTAG 7200
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||| ||| | |||||||| |||| | |||| |||||| |||| ||||||||||
Sbjct 7201 CTCTAGAAGTACTATGGTTATCCGAGTAG-CATGTACCATCAAACAAACTATAACTGATT 7259
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473
||||||||||||||||||||||| || | ||| | | ||||| | ||||||||||||||
Sbjct 7260 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTCACACATGCATGGCTTA 7319
Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||
Sbjct 7320 ATCTTTGAGACAAGCATATGACTACTGGCAG 7350
>seq2908
Length=48135
Score = 497 bits (550), Expect = 3e-138
Identities = 420/510 (82%), Gaps = 15/510 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | |||||| |||| ||||||||||||||||||
Sbjct 16264 GTGCTCATTCCAATTACCAGACTTGAG-GAGCCCGGTATTGTTATTTATTGTCACTACCT 16206
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||| |||| ||| |||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 16205 CCCCATGTCAGGACTGGGTAATTTGCACGCCTACTGCCTTCCTTGGATGTGGTAGCCGTT 16146
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||| ||||||||||||||||| || | |||| | |||||||||
Sbjct 16145 TCTCAGGCTCCCTCTCTAGAATCGAACCCTAATTCTCCATCACCCATCACCACCATGGTA 16086
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||| |||| ||||||||||||||||||||||| ||||||| ||
Sbjct 16085 GGCCCCTATCCTACCATCAAAAGCTGATAGGGCAGAAATTTGAATGATGCATCGCCAGCA 16026
Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295
|| |||| |||||| |||| |||||| |||||||| || || || | | || |
Sbjct 16025 CATGGGCCGTGCGATCCGTTGAGTTATCATGAATCATCAGAGAACCGAGCACAGCCCGTG 15966
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354
| | ||||||||||||||| || ||||||| ||||||||||||| | |||||||||||
Sbjct 15965 TCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCATGTATTAG 15906
Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414
|||||||||||| || |||||| |||| | ||| |||||| |||| ||| ||||||
Sbjct 15905 CTCTAGAATTACTACAGTTATCTGAGTAG-CATATACCATCAAACAAACTATATCTGATT 15847
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474
||||||||||||| ||| ||| || | | | ||||| | |||||||||||||||
Sbjct 15846 TAATGAGCCATTCAGAGT----CTGAAT---TAGTTCATACTCACACATGCATGGCTTAA 15794
Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||||||||||||||||||||||||||
Sbjct 15793 TTTTTGAGACAAGCATATGACTACTGGCAG 15764
>seq1607
Length=110441
Score = 495 bits (548), Expect = 1e-137
Identities = 422/512 (82%), Gaps = 19/512 (4%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | |||||| |||| ||||||||||||||||||
Sbjct 40797 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCCGGTATTGTTATTTATTGTCACTACCT 40739
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||| |||| ||| | |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 40738 CCCCATGTCAGGACTAGGTAATTTGCACGCCTACTGCCTTCCTTGGATGTGGTAGCCGTT 40679
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||| ||||||||||||||||| || | |||||| |||||||||
Sbjct 40678 TCTCAGGCTCCCTCTCCAGAATCGAACCCTAATTCTCCATCACCCGTCACCACCATGGTA 40619
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||| ||||||||||||||| |||||||||||| | ||||| ||
Sbjct 40618 GGCCCCTATCCTACCATCAAAAGTTGATAGGGCAAAAATTTGAATGATGCGTCGCCAGCA 40559
Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA--AGGGC--- 294
|| |||| |||||| |||| |||||| || ||||| | |||| |||| || ||
Sbjct 40558 CATGGGCCGTGCGATCCGTTGAGTTATCATCAATCATC--GGAGAACCGAGCAGAGCCCG 40501
Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
|| | ||||||||||||||| || ||||||| ||||| ||||||| | |||||||||
Sbjct 40500 TGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCATGTATT 40441
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| || |||||| |||| | |||| |||||| |||| ||| ||||
Sbjct 40440 AGCTCTAGAATTACTACAGTTATCTGAGTAG-CATGTACCATCAAACAAACTATATCTGA 40382
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472
||||||||||||||| ||| ||| || | | | ||||| | |||||| ||||||
Sbjct 40381 TTTAATGAGCCATTCAGAGT----CTGAAT---TAGTTCATACTCACACATGCGTGGCTT 40329
Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| ||||||||||||||||||||||||||||
Sbjct 40328 AATTTTTGAGACAAGCATATGACTACTGGCAG 40297
Score = 311 bits (344), Expect = 3e-82
Identities = 273/333 (82%), Gaps = 9/333 (3%)
Strand=Plus/Minus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 97523 GTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCA 97464
Query 238 GCTCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC-- 294
| || || ||||| || ||| |||||| |||||||| || || | || ||
Sbjct 97463 ACACATGGGTCATGCAATCCGTCGAGTTATCATGAATCATTGGAGAACCGGGCAGAGCCC 97404
Query 295 --GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTAT 351
|| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||
Sbjct 97403 GTGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTAT 97344
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411
||||||||||||||| | |||||| | | || | |||| ||||||||||| |||||||
Sbjct 97343 TAGCTCTAGAATTACTATGGTTATTCGAG-AG-CATGTACCATCAAATAAACTATAACTG 97286
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGC 470
|||||||||||||||||| ||||||| || | ||| | | ||||| | |||||||||||
Sbjct 97285 ATTTAATGAGCCATTCGCGGTTTCACAGTCTGAATTAGTTCATACTCACACATGCATGGC 97226
Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCA 503
|||||||||||||||||||||||||||||||||
Sbjct 97225 TTAATCTTTGAGACAAGCATATGACTACTGGCA 97193
Score = 185 bits (204), Expect = 3e-44
Identities = 127/142 (89%), Gaps = 1/142 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | |||||| ||| ||||||||||||||||||
Sbjct 104172 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCCGATATTGTTATTTATTGTCACTACCT 104114
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 104113 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCTGTT 104054
Query 121 TCTCAGGCTCCCTCTCCGGAAT 142
||||||||||||||| | ||||
Sbjct 104053 TCTCAGGCTCCCTCTTCAGAAT 104032
>seq7681
Length=12051
Score = 439 bits (486), Expect = 7e-121
Identities = 356/422 (84%), Gaps = 8/422 (2%)
Strand=Plus/Minus
Query 90 CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 149
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 12051 CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTATCCGGAATCGAACCC 11992
Query 150 TAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATA 209
|||||| |||| |||| | ||||||||||||| ||||||||||||||||||||||||
Sbjct 11991 TAATTCTCCGTCACCCATCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATA 11932
Query 210 GGGCAGAAATTTGAATGAACCATCGCCGGCTCA-AGGCCATGCGATTCGTTAAGTTATTA 268
|||||||||||||||||| | ||||| || || |||| |||||| ||| |||||| |
Sbjct 11931 GGGCAGAAATTTGAATGACGCGTCGCCAGCACATGGGCCGTGCGATCCGTCGAGTTATCA 11872
Query 269 TGAATCA-CCAAGGAGC-CCCGAAG--GGCGTTGGTTTTTTATCTAATAAATACACCCCT 324
|| |||| | || | | || || | || | ||||||||||||||| || ||||
Sbjct 11871 TGGATCATCGGAGAATCGGGCGGAGCCCGTGTCGACCTTTTATCTAATAAATGCATCCCT 11812
Query 325 TCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383
||| ||||||||||||| | ||| ||||||||||||||||||| | |||||||| ||||
Sbjct 11811 TCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTATGGTTATCCGAGTAG 11752
Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443
| |||| |||||| |||| |||| ||||||||||||||||| |||||||||| || |
Sbjct 11751 -CATGTACCATCAAACAAACTATAATTGATTTAATGAGCCATTTGCAGTTTCACAGTCTG 11693
Query 444 GATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502
||| | | ||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 11692 AATTAGTTCATACTCACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 11633
Query 503 AG 504
||
Sbjct 11632 AG 11631
>seq5
Length=51955539
Score = 367 bits (406), Expect = 4e-99
Identities = 397/519 (76%), Gaps = 24/519 (5%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| ||||||| |||||| ||| | | | |||| ||| | ||||||||||||||||||
Sbjct 21409405 GTGCTCATTCTAATTACCAGAGTCTAGA-AGCCTAATATTATTATTTATTGTCACTACCT 21409463
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| | |||| |||||||||||||||| |||||||||||| ||| |||||||||||| ||
Sbjct 21409464 CTCTATGTCAGGATTGGGTAATTTGCATGCCTGCTGCCTTTCTTAGATGTGGTAGCCATT 21409523
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
| ||||||||| |||| |||||| || |||||||| | | | | | | |||||||||
Sbjct 21409524 TTTCAGGCTCCTTCTCTGGAATCAAATCCTAATTCTCTATCATCTATCAACACCATGGTA 21409583
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| |||| ||||||||||||||| ||||| |||||||||||| | ||||||| ||
Sbjct 21409584 GGCTCCTATACTACCATCGAAAGTTAATAGGATAGAAATTTGAATCATGCATCGCC-GCA 21409642
Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC-CCCGAAGGGC---- 294
|| ||| |||||| ||| |||||| |||||||| | ||||| || | | ||
Sbjct 21409643 CATGGGCTGTGCGATCTGTTGAGTTATCATGAATCATC--GGAGCACCTGTGGAGCTCAT 21409700
Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATTA 353
| || ||||||||||||| | || |||||| | ||||| || ||| | | |||||
Sbjct 21409701 GCTGACATTTTATCTAATAAGTGCATCCCTTCTGCAAGTCAGGATTTATTATACTTATTA 21409760
Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413
|||||||||||| | |||||||| ||| | ||| |||||||||| |||||||||
Sbjct 21409761 GCTCTAGAATTATTATGGTTATCCGAATAG-CACGTATCATCAAATAAATTATAACTGAT 21409819
Query 414 TTAATGAGCCATTCGCAGTTTCACTGT------------ATAGATTGCTTATACTTAGAC 461
|||||||||||| |||| |||||| || ||| | | | ||||||| ||
Sbjct 21409820 TTAATGAGCCATACGCAATTTCACAGTTTGAATTAGTTCATACTTAGTTCATACTTACAC 21409879
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500
|||||| |||||||||||||||||| ||||||||||||
Sbjct 21409880 ATGCATAACTTAATCTTTGAGACAAGTATATGACTACTG 21409918
>seq4607
Length=37173
Score = 327 bits (362), Expect = 3e-87
Identities = 279/337 (83%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 175 ATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234
|| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 16213 ATAGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCG 16154
Query 235 CCGGCTCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCGAAG 291
|| || || |||| |||||| ||| |||||| |||||||| || || || ||
Sbjct 16153 CCAGCACATGGGCCTTGCGATCCGTCGAGTTATCATGAATCATTGGAGAACCGGGCGGAG 16094
Query 292 --GGCGTTGGTTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTAGCATG 348
| || | ||||||||||||||| || ||| ||| ||||||||||||| | ||| |
Sbjct 16093 CCCGTGTCGACCTTTTATCTAATAAATGCATCCCTTTCAGAAGTCGGGGTTTGTTGCACG 16034
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408
|||||||||||||||||| ||||||||||| |||| | |||| |||||| |||| ||||
Sbjct 16033 TATTAGCTCTAGAATTACTACGGTTATCCAAGTAG-CATGTACCATCAAACAAACTATAA 15975
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCAT 467
|||||||| |||||||||||||||||||| || | ||| | | |||| | ||||||||
Sbjct 15974 CTGATTTACTGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACCCACACATGCAT 15915
Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||
Sbjct 15914 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 15878
>seq24894
Length=4297
Score = 230 bits (254), Expect = 7e-58
Identities = 161/182 (88%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | |||||| |||| ||||||||||||||||||
Sbjct 3239 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCCGGTATTGTTATTTATTGTCACTACCT 3297
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 3298 CCCCGTGTCAGGATTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 3357
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||
Sbjct 3358 TCTCAGGCTCCCTCTCCAGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 3417
Query 181 GG 182
||
Sbjct 3418 GG 3419
>seq4453
Length=34979
Score = 230 bits (254), Expect = 7e-58
Identities = 161/182 (88%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | ||||| |||| ||||||||||||||||||
Sbjct 9488 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCTGGTATTGTTATTTATTGTCACTACCT 9546
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9547 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9606
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||| || |||||||||||||||| || | |||||| |||||||||
Sbjct 9607 TCTCAGGCTCCCTCTTCGAAATCGAACCCTAATTCTCCATCACCCGTCACCACCATGGTA 9666
Query 181 GG 182
||
Sbjct 9667 GG 9668
Score = 217 bits (240), Expect = 4e-54
Identities = 195/239 (82%), Gaps = 7/239 (3%)
Strand=Plus/Plus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 14829 GTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCATCGCCA 14888
Query 238 GCTCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCGAAGGGC 294
|| || |||| |||||| ||| |||||| |||||||| | | || || || || |
Sbjct 14889 GCACATGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGAAGAACCGGGCGGAGCCC 14948
Query 295 G--TTGGTTTTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTAT 351
| | | ||||||||||||||| | |||||||| |||||||||||| | ||| ||||
Sbjct 14949 GTATCGACCTTTTATCTAATAAATGGATCCCTTCCGAAAGTCGGGGTTTGTTGCACGTAT 15008
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410
||||||||||||||| |||||||||| |||| | |||| |||||| |||| ||||||
Sbjct 15009 TAGCTCTAGAATTACTACGGTTATCCGAGTAG-CATGTACCATCAAACAAACTATAACT 15066
>seq36652
Length=2106
Score = 228 bits (252), Expect = 2e-57
Identities = 176/205 (86%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 302 TTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| || ||||| | |||||||||||| | ||| ||||||||| |||
Sbjct 50 TTTTATCTAATAAATGCATTCCTTCTGGAAGTCGGGGTTTGTTGCACGTATTAGCTTTAG 109
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||| | |||||||| |||| | | ||| |||||| |||| ||||||||||||||||
Sbjct 110 AATTACTATGGTTATCCGAGTAGCATG-TACCATCAAACAAACTATAACTGATTTAATGA 168
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTT 479
||||||||||||||||| || | ||| || ||||| | ||||||||||||||||||||
Sbjct 169 GCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTCACACATGCATGGCTTAATCTTT 228
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||| ||
Sbjct 229 GAGACAAGCATATGACTACTGGTAG 253
>seq16486
Length=9945
Score = 221 bits (244), Expect = 4e-55
Identities = 159/182 (87%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | |||||| ||| ||||||||||||||||||
Sbjct 215 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCCGATATTGTTATTTATTGTCACTACCT 273
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 274 CCCCATGTCAGGATTGGGTAATTTGCGCGCCTACTGCCTTCCTTGGATGTGGTAGCCGTT 333
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||| |||||||||||||||||||||||||| || | |||| | |||||||||
Sbjct 334 TCTCAGGCACCCTCTCCGGAATCGAACCCTAATTCTCCATCACCCATCACCACCATGGTA 393
Query 181 GG 182
||
Sbjct 394 GG 395
>seq1766
Length=104952
Score = 217 bits (240), Expect = 4e-54
Identities = 158/182 (87%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||| | | |||||| |||| ||||||||||||||||||
Sbjct 104567 GTGCTCATTCCAATTACCAGACTCGAG-GAGCCCAGTATTGTTATTTATTGTCACTACCT 104509
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 104508 CCCTATGTCAGGATTGGGTAATTTGCGTGCCTGCTTTCTTCCTTGGATGTGGTAGCCGTT 104449
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||| ||||||||||||||||| || | |||||| |||||||||
Sbjct 104448 TCTCAGGCTCCCTCTCCAGAATCGAACCCTAATTCTCCATCACCCGTCACCACCATGGTA 104389
Query 181 GG 182
||
Sbjct 104388 GG 104387
>seq12
Length=28800575
Score = 210 bits (232), Expect = 7e-52
Identities = 188/233 (81%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| ||||||||| |||| ||| ||| ||| || | || |||||||||| |||||||
Sbjct 27047483 GTGCTCATTCCAGTTACCAGATTCAAG-GAGTCCGGCATTGTTATTTATTGTAACTACCT 27047425
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|| |||| |||||| |||||||| |||||||||| ||| |||||| |||||||||||
Sbjct 27047424 CCTTATGTCAAGATTGGATAATTTGCACGCCTGCTGCTTTCTTTGGATATGGTAGCCGTT 27047365
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
| | ||||||| |||| |||| |||||||||||| || | | | | ||||||||||
Sbjct 27047364 TTTTAGGCTCCTTCTCTAGAATTGAACCCTAATTCTCCATCA-TCATCACTACCATGGTA 27047306
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC 233
|||| ||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct 27047305 GGCCCCTATCCTACCATCAAAAGTTGATAGGGTAGAAATTTGAATAATGCATC 27047253
Score = 118 bits (130), Expect = 3e-24
Identities = 120/155 (77%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||| ||||||||||| |||| ||| |||| |||| | ||||||||||||||| ||
Sbjct 27051949 GTACTTATTCCAATTACTAGACTCAAG-GAGCTTGGTATTATTATTTATTGTCACTATCT 27052007
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| | ||||| | ||||| ||||||||| | ||| || ||| ||| ||||||||||| ||
Sbjct 27052008 CTCTGTGTCAGAATTGGATAATTTGCGTGTCTGTTGTCTTTCTTAGATGTGGTAGCTATT 27052067
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC 155
| | || | | |||| ||||||| | ||||||
Sbjct 27052068 TTTGAGATTTTTTGTCCGAAATCGAATCTTAATTC 27052102
>seq4380
Length=14033
Score = 199 bits (220), Expect = 1e-48
Identities = 202/257 (79%), Gaps = 12/257 (5%)
Strand=Plus/Minus
Query 199 GAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG-CCATGCGATTCG 257
||||||||||||| ||||||||||||||| | |||||| | || ||||||||| |
Sbjct 9763 GAAAGTTGATAGG-CAGAAATTTGAATGATGTGTTGCCGGCATACGGGCCATGCGATCCA 9705
Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG------TTGGTTTTTTATCTAA 311
| |||||| |||||||| | ||||| || | | | | | ||||||||||
Sbjct 9704 TCGAGTTATCATGAATCATC--GGAGCAACGGATGAAGCCCATATCGACCTTTTATCTAA 9647
Query 312 TAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACG 370
||||| || |||||| | ||||||| |||| | ||||||||||||| ||||||||| |||
Sbjct 9646 TAAATGCATCCCTTCTGGAAGTCGGAGTTTGTTGCATGTATTAGCTTTAGAATTACTACG 9587
Query 371 GTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCA 430
||||||| |||| | | ||| ||||||||||| |||||| ||||||||||||||| |||
Sbjct 9586 GTTATCCGAGTAGCATG-TACCATCAAATAAACTATAACTAATTTAATGAGCCATTTGCA 9528
Query 431 GTTTCACTGTATAGATT 447
|||||| ||| | ||||
Sbjct 9527 GTTTCATTGTTTGGATT 9511
>seq1
Length=68435666
Score = 197 bits (218), Expect = 4e-48
Identities = 255/347 (73%), Gaps = 10/347 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| || ||||||||||| |||| | | |||| || ||||||||||| ||||||
Sbjct 68164672 GTGCTTATTCCAATTACCAGACTTGAGA-AGCCTGGTGCTGTTATTTATTGTCTCTACCT 68164730
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||| ||||| | ||||||| || ||| |||||||| |||||||||| | | |||
Sbjct 68164731 CCCTATGTTAGGATTAGATAATTTGTGCACCTACTGCCTTCTTTGGATGTGGCAACTGTT 68164790
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||| ||||| || | | ||||| || ||||||| | | ||| | ||||||||||
Sbjct 68164791 TCTCGGGCTCTCTTTTCAGAATCAAAGACTAATTCTTCATCTCCCATCACTACCATGGTA 68164850
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| |||| ||| || |||||||||||||| |||||||||||||| ||| | ||
Sbjct 68164851 GGCTCCTATTCTATCACTGAAAGTTGATAGGGTAGAAATTTGAATGATGCATTATCAGCA 68164910
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG---AAGGGC--- 294
|| ||| || || | || |||||| |||||||| ||| ||| || || | |
Sbjct 68164911 CATGGCTGTGTAATCCATTGAGTTATCATGAATCATCAA--AGCATCGAGCAAAGACTAT 68164968
Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTT 340
|||| ||||||||||||||| | ||||||| |||| ||||||
Sbjct 68164969 GTTGACCTTTTATCTAATAAATGTATCCCTTCCATAAGTTAGGGTTT 68165015
>seq2879
Length=54927
Score = 188 bits (208), Expect = 2e-45
Identities = 144/168 (86%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397
||| | ||| ||||||||||||||||||| || ||||||| |||| | | ||| |||||
Sbjct 34638 TTTGTTGCACGTATTAGCTCTAGAATTACTACAGTTATCCGAGTAGCATG-TACCATCAA 34696
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACT 456
| |||| |||||||||||||||||||||||||||||||| || | ||| || |||||
Sbjct 34697 ACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCATAGTCTGAATTAGTTCATACT 34756
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 34757 CACACATGTATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 34804
>seq16
Length=21371083
Score = 167 bits (184), Expect = 7e-39
Identities = 160/201 (80%), Gaps = 3/201 (1%)
Strand=Plus/Plus
Query 302 TTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| || ||| | ||||||| | ||| | ||| | ||||||||||
Sbjct 20084748 TTTTATCTAATAAATGCATTTCTTTCAGAAGTCGAGATTTGTTGCACATGTTAGCTCTAG 20084807
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||| ||||||||| |||| | | ||| |||||| |||| |||||||||||||| |
Sbjct 20084808 AATTACTGCGGTTATCCGAGTAGCATG-TACCATCAAACAAACTATAACTGATTTAATAA 20084866
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTT 479
| ||||| | ||| || | | ||| || ||||| | |||| ||| |||||||||||
Sbjct 20084867 GACATTCATAATTTTACAATCTGAATTAGTTCATACTCAAACATACATAGCTTAATCTTT 20084926
Query 480 GAGACAAGCATATGACTACTG 500
|||||||||||||||||||||
Sbjct 20084927 GAGACAAGCATATGACTACTG 20084947
>seq13
Length=27817470
Score = 131 bits (144), Expect = 5e-28
Identities = 140/180 (78%), Gaps = 10/180 (6%)
Strand=Plus/Minus
Query 43 TATTTATTGTCACTACCTCCC-CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101
|||||||||||||||||| | | |||| | ||||||||||||| ||| ||||||||
Sbjct 25358357 TATTTATTGTCACTACCTTTCTCATGTCAAGGTTGGGTAATTTGCACGCAATCTGCCTTC 25358298
Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
|||||||||| ||||| |||||| |||| || || ||| | |||||| ||||| | ||
Sbjct 25358297 CTTGGATGTGATAGCCATTTCTCTGGCTTTCTTTCTGGAGTTGAACCCCAATTCTCTGT- 25358239
Query 162 ACCCGTTGAT-ACCA----TGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
||| | || |||| |||||| | |||||||| ||| |||||||||| || ||||
Sbjct 25358238 -CCCCT--ATCACCACTATTGGTAGAACTCTATCCTATCATGGAAAGTTGATGGGTCAGA 25358182
>seq875
Length=163878
Score = 120 bits (132), Expect = 9e-25
Identities = 85/96 (89%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATG 468
||||||||||||||||||||||||||| || | ||| || ||||| | |||||||||
Sbjct 136715 TGATTTAATGAGCCATTCGCAGTTTCATAGTCTGAATTAGTTCATACTCACACATGCATG 136656
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||| ||||||
Sbjct 136655 GCTTAATCTTTGAGACAAGCATATGACTATTGGCAG 136620
Score = 109 bits (120), Expect = 2e-21
Identities = 86/102 (84%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 175 ATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234
|| ||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||
Sbjct 119390 ATAGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCATAAATTTGAATGATGCGTCG 119331
Query 235 CCGGCTCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCA 275
|| || || |||| || ||| ||| |||||| ||||||||
Sbjct 119330 CCAGCACATGGGCCGTGTGATCCGTCGAGTTATCATGAATCA 119289
>seq1542
Length=91076
Score = 116 bits (128), Expect = 1e-23
Identities = 86/99 (87%), Gaps = 1/99 (1%)
Strand=Plus/Plus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 6654 GTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCA 6713
Query 238 GCTCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCA 275
|| || |||| |||||| ||| |||||| ||||||||
Sbjct 6714 GCACATGGGCCGTGCGATCCGTCGAGTTATCATGAATCA 6752
Score = 87.8 bits (96), Expect = 5e-15
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 431 GTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
||||||| || | ||| || ||||| | ||||||||||||||||||||||||||||||
Sbjct 19568 GTTTCACAGTCTGAATTAGTTCATACTCACACATGCATGGCTTAATCTTTGAGACAAGCA 19627
Query 490 TATGACTACTGGCAG 504
|||||||||| ||||
Sbjct 19628 TATGACTACTAGCAG 19642
Score = 77.0 bits (84), Expect = 1e-11
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 7105 ACATGCATGGCTTAATCTTTGAGACAAACATATGACTACTGGCAG 7149
>seq18
Length=5282998
Score = 93.3 bits (102), Expect = 1e-16
Identities = 128/178 (72%), Gaps = 1/178 (1%)
Strand=Plus/Plus
Query 41 AGTATTT-ATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99
||||||| || ||||||||| | ||| | | || | |||||| | || |||||| |
Sbjct 4615188 AGTATTTTATCATCACTACCTTTCAGTGCCAAGCTTAGATAATTTCCATGCATGCTGCAT 4615247
Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159
|||||||| | ||||| ||||||| ||| ||| |||||| |||| |||||
Sbjct 4615248 TCCTTGGACGCGGTAGTTGTTTCTCCAGCTGTTTCTTTGGAATCAAACCTTAATTTTTTT 4615307
Query 160 TTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAA 217
| | | |||| |||||| | ||| || ||||| |||||||||||||||||||
Sbjct 4615308 GTCGCTCTCACCACCACGGTAGGTCCCTAACCAACCATTGAAAGTTGATAGGGCAGAA 4615365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509794918656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |