Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq40061 659 0.0 seq14 150 2e-31 seq1 136 4e-27 seq7 104 3e-17 seq357 84.2 2e-11 seq4 82.4 8e-11 >seq40061 Length=156973 Score = 659 bits (730), Expect = 0.0 Identities = 741/989 (75%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| |||| || | ||||| || || | || |||||||| || || Sbjct 1137 TTCTGCAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 1078 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| || | ||| | |||||| |||| ||||| |||||||||| |||||||| Sbjct 1077 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTCATTATCGCCTTCATTGCTGCTCC 1019 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || ||||| || |||||||| || ||||||| || | || || ||||| Sbjct 1018 TCCAGTAGATATTGATGGTATTCGTGAACCAGTTTCTGGTTCTCTACTTTATGGAAACAA 959 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 || ||||||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 958 TATTATCTCTGGTGCCATTATTCCGACTTCTGCAGCTATCGGTTTGCATTTTTATCCGAT 899 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 |||||||| ||||| | || |||||| | || || || ||||||| | || | || Sbjct 898 ATGGGAAGCGGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 839 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | || |||||||||||||||||||| || ||| Sbjct 838 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 779 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 || ||||||||||| ||||| ||||||||| || ||||| || || |||||| |||| Sbjct 778 CCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 719 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||| ||| | ||||||| | ||||| || |||||| |||| ||||||| | || || Sbjct 718 TGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 659 Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341 ||||||||||| |||| ||| |||||||||| || |||||||| |||||||||||||| Sbjct 658 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAACACAACATCCTTATGCATCC 599 Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 598 ATTTCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 539 Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461 || |||| || |||||| | |||| || || || |||| || || || || Sbjct 538 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGCGGG 479 Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521 ||||| ||||||||||||||||| ||||| || ||||| || || ||||| || || || Sbjct 478 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 419 Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581 || ||||||||||||||||| || ||||| || || || | || |||||| | || Sbjct 418 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCCTTACATTTCTTCTTGGC 359 Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641 |||||||||||| || || |||||||||||||| | ||| || ||| ||||| ||||| Sbjct 358 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 299 Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701 || ||||||||||| |||||||| || | | |||| || || | ||| | ||||| Sbjct 298 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTTATCAACAC 239 Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761 |||||| || | | || || ||| || || |||||||| ||||| || ||||| || Sbjct 238 TTGGGCTGATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGC 179 Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCTG 160790 ||||||||||||||| ||||| ||||||| Sbjct 178 TCACAACTTCCCTCTAGACCTAGCTGCTG 150 Score = 600 bits (664), Expect = 1e-166 Identities = 736/995 (74%), Gaps = 9/995 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || |||||||||||||| ||||||||||| || | || ||||| ||||||| | ||| Sbjct 33106 GACCGTTTCGTTTTTGTAGGCTGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCT 33165 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| |||| || || ||||| | || ||||||||||||||| | || Sbjct 33166 TTAGGAGGTTGGTTTACAGGTACAACTTTTGTAACTTCATGGTATACCCATGGATTGGCC 33225 Query 161665 AGTTCCTATCTTGAGGGT-GCAAATTTTCTT-ACAGCGGCAGTTAGCACTCCAGCTGACG 161722 ||||||||| | || ||| |||| |||||| || || |||||| |||||| || | Sbjct 33226 AGTTCCTATTTGGAAGGTTGCAA--TTTCTTGACCGCTGCAGTTTCCACTCCTGCGAATA 33283 Query 161723 CTATGGGTCATTCTCTTCTT-CTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGG 161781 | | | ||||| ||| || || || ||||| |||||||| ||||||||||| | Sbjct 33284 GTTTAGCACATTC-CTTGTTGCTACTATGGGGCCCTGAGGCACAAGGGGATTTTACTCGT 33342 Query 161782 TGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATT 161841 ||| ||| | || || || |||| |||||| || ||||| || | ||||| || || Sbjct 33343 TGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTCCATGGTGTTTTCGGACTAATA 33402 Query 161842 GGATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGC 161900 || || ||| | ||||| || ||||||||||| ||| | | | || ||||| ||||| Sbjct 33403 GGTTTTATGTTACGTCAATTCGAACTTGCTCGATCTGTGCAAT-TGCGACCTTATAATGC 33461 Query 161901 TATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGG 161960 || || ||||||| ||| |||||||||||||| || || || || ||||| ||||| Sbjct 33462 AATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTGGG 33521 Query 161961 ACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACT 162020 || || |||||||| ||||| ||||| || || ||||| || | ||| | || Sbjct 33522 TCAATCTGGTTGGTTCTTTGCGCCCAGTTTTGGCGTAGCAGCTATATTTCGATTCATCCT 33581 Query 162021 TTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGG 162080 ||| | ||||| || || ||||||||| | || || || || |||||||| || || || Sbjct 33582 CTTCTTCCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 33641 Query 162081 TATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTA 162140 | || || | |||| |||| | |||||||| |||| || || ||||| || | | Sbjct 33642 AGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATT 33701 Query 162141 CCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGAC 162200 | |||||||||| |||||||| ||| |||||| || | || |||| || ||||| Sbjct 33702 CGAAGATGGTGACGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAGAC 33761 Query 162201 TTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAA 162260 ||| || ||||| ||||| ||||| || ||||| || ||||| || |||||||| || Sbjct 33762 TTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 33821 Query 162261 TAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTC 162320 ||| |||||||| |||||||||||||| || || || || | ||| | |||| ||| | Sbjct 33822 TAAACGTTGGTTACATTTCTTTATGCTATTTGTACCAGTAACCGGTTTATGGATGAGTGC 33881 Query 162321 TATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGAT 162380 | | || | | || || ||||| || || ||||| || ||||| || || || || || Sbjct 33882 TCTTGGGGTAGTCGGCCTGGCTCTGAACCTCCGTGCCTATGACTTCGTTTCCCAAGAAAT 33941 Query 162381 TCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGA 162440 ||||||||||| |||||||||||||| || ||||||||||| ||||||||||| || || Sbjct 33942 CCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATCCTCTTAAACGA 34001 Query 162441 AGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGA 162500 |||| ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||| Sbjct 34002 AGGTATTCGTGCTTGGATGGCGGCTCAGGATCAGCCTCATGAAAACCTTATATTCCCTGA 34061 Query 162501 GGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 ||| ||||| || | || ||||| || | ||||| Sbjct 34062 GGAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 34095 >seq14 Length=24379743 Score = 150 bits (166), Expect = 2e-31 Identities = 247/356 (69%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 161899 GCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTG 161958 || ||||| ||||||| ||| |||||||||||||| | || || || ||||| || Sbjct 16929123 GCAATTGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTATATTCCTGATTTATCCATTG 16929182 Query 161959 GGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTA 162018 || | || |||||||| ||||| ||||| || || |||| || ||| | Sbjct 16929183 GGTCGATCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAACTATATTTCTATTCATC 16929242 Query 162019 CTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCA 162078 ||||| | ||| | || | ||||||||| | || || || || |||||||| || || Sbjct 16929243 CTTTTTTTCCAAAGGTTTTATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCT 16929302 Query 162079 GGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTC 162138 || | || || | |||| |||| | |||||||| |||| || || ||||| | | Sbjct 16929303 GGAGTATTAGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATATTTTA 16929362 Query 162139 TACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAG 162198 | | |||||||||| |||||||| ||| | |||||| || | || |||| || ||| Sbjct 16929363 TTCGAAGATGGTGACGGTGCAAATACATTCCATGCTTTTAACCCAACTCAAGCTGAAGAG 16929422 Query 162199 ACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTT 162254 ||||| ||||| ||| | || || ||||| || ||||| | ||||||| Sbjct 16929423 ACTTATGTAATGGTCACTACTCACTACTTTTGGTCCCAAATCTTTGAGGTTGCTTT 16929478 >seq1 Length=68435666 Score = 136 bits (150), Expect = 4e-27 Identities = 197/277 (71%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 160514 TACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTC 160573 || || || || ||||||||| ||||| | || ||||| || | | | || ||| Sbjct 3686464 TATTTTGGCCGATTGATCTTCTAATATACTAGTTTCAACAATTCTCATTTCTTACATTTC 3686523 Query 160574 TTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATG 160633 ||| | |||| ||||||||| || | |||||||||||||| | || || ||| ||| Sbjct 3686524 TTCTTGGCTGTTTGGCCTGTAGTAAGTATCTGGTTCACTGCTTTAAGTATTAGTACTATG 3686583 Query 160634 GCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTT 160693 | || || || |||| |||||| |||||||| || | | ||| || | ||| Sbjct 3686584 ACTTTTAACCTAAATGATTTCAA-TTCAACCAATCTGTAGTTGACCGTCAGAGTTGTGTT 3686642 Query 160694 CTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAG 160753 | || |||||| | || | | || ||||| ||| || |||||||| ||||| || Sbjct 3686643 ATCAATACTTGGACTGATATCATCAATTGCGCTAATCTTGGTATGGAAGTAATGCATGAA 3686702 Query 160754 CGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCTG 160790 ||||| |||||||||||| |||| ||||| ||||||| Sbjct 3686703 CGTAATGCTCACAACTTCTCTCTAGACCTAGCTGCTG 3686739 >seq7 Length=43454766 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 162390 GGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCG 162449 ||| |||||||||||||| || ||||| | ||| ||||||||||| ||||||| | |||| Sbjct 40226799 GGAAGATCCTGAATTTGAGACTTTCTATATCAAAAATATCCTCTTAAATGAAGATATTCG 40226858 Query 162450 TGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCT 162509 ||| ||| |||| | |||||||| ||| | || || ||||||||||| | ||||| Sbjct 40226859 TGCTTGGATGGCGGCTCAAGATCAACCTCATAAAAATCTTATATTCCCTGAGAAGGTTCT 40226918 >seq357 Length=580603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 162333 TGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGA 162392 ||| || ||||| || || ||||| || ||||| | || || || || | |||||| || Sbjct 527712 TGGCCTGGCTCTGAACCTCCGTGCCTATGACTTCATTTCCCAAGAAATCCATGCAGCAGA 527653 Query 162393 GGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCT 162431 |||||||||||||| || ||||||||||| ||||| || Sbjct 527652 AGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCT 527614 >seq4 Length=57251647 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/124 (75%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 160277 GGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATG 160336 || || |||| |||||| ||||| || ||||||||| ||||||||||| | ||||||| Sbjct 12483529 GGAATATCTGATACTTTCAACTAGAT---TGTATTCCAGGCAGAACACAACAGCCTTATG 12483585 Query 160337 CATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATG 160396 ||| || |||||| | | ||| || | || |||| || || || || ||||||| Sbjct 12483586 AATCAATTTCACATGTTGGATGTAACTAGTGTTTTCGATGACTCCCTATTTAGTGCTATG 12483645 Query 160397 CATG 160400 |||| Sbjct 12483646 CATG 12483649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551099891575800