Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20guineensis_20[refseq_20GCF_5F000442705.1_202013-08-13] 40,061 sequences; 1,535,178,229 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 2e-14 >seq16 Length=21371083 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 162607 GCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACA 162666 |||| || ||| || || ||||| ||||| ||| | ||| | || |||| |||||||| Sbjct 14453863 GCCTGTAACGGCATCCTCTTCAACCACGAGAGCCCCCGCCGCGGGGAGAACTTCGTCACC 14453804 Query 162667 CGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTT 162726 ||||||||| ||| ||| | ||| || | || || ||||| | | || || Sbjct 14453803 CGCAAGATCACCCGCGCCGTCGGCCGGATCCGCGTCGGCCTCCAGACCAAGCTTTTCCTC 14453744 Query 162727 GGAAACCTCAATGCC-CGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTG 162785 || || ||| ||| ||| | |||||||| |||| |||||||| ||||||||||| Sbjct 14453743 GGCAATCTCTCGGCCGCGAGG-GACTGGGGGTTCGCCGGGGACTACGTCGAGGCTATGTG 14453685 Query 162786 GTTGATGCTTCAGCAAGAGAAGCC 162809 | | ||||| ||||| || |||| Sbjct 14453684 GCTCATGCTGCAGCAGGACGAGCC 14453661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691112943162360