Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq3566 73.4 3e-11 >seq3566 Length=49936 Score = 73.4 bits (80), Expect = 3e-11 Identities = 89/119 (75%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||| |||||||||||||||||| | || || |||||||||| | || Sbjct 9873 TAACTTTTATCTGTTGAGCGATGGCCCTTCTACTCGACACCGTCGGATCACTAAGGCCAA 9814 Query 61 CTTTCGCATCTGCTCTAG-TTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| ||| | || | ||| | | | ||| |||||| |||||||| ||||||| Sbjct 9813 CTTTCG--TCTTCACTCGATTGGCGGTTTTGCAGTCAAGCTTCCTTTTGCCTTTGCACT 9757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351911705200