Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq859 136 3e-27 >seq859 Length=348630 Score = 136 bits (150), Expect = 3e-27 Identities = 288/425 (68%), Gaps = 5/425 (1%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| ||||| || ||||| |||||| ||||| | | || ||| | Sbjct 128018 GCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGTCCGCTTCATGTCC 128077 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || || | | ||||| || ||||||||||||||||| ||||| ||||| || Sbjct 128078 GACGTCCAGATCCCCGAGGCTCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 128137 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 ||||| ||||||||| | ||| |||| | ||||||| ||| | || ||| || Sbjct 128138 CACTCCGAGATGTACTCCCTCCTCCTCGAATCCTACATCAAGGATCCGGACGAAAA-GAT 128196 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452 || | ||| ||| ||||||| | |||||||||| ||| || | |||||| || Sbjct 128197 CGCCTTTTCGC-GCCGTCGAGACCGTCCCGGCGGTGACAAAGAAGGCCCAATGGGCCCTC 128255 Query 61453 AATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512 |||||| ||| | || | | || | || || | | |||||||| | || Sbjct 128256 CGGTGGATCG--AGTCCTCCGAGT-CTTTCGCCGAGCGCCTCGTTGCATTTGCCGCCGTT 128312 Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||||| | || ||| ||| || || | | ||||| ||| | ||||| ||||| || Sbjct 128313 GAGGGGATCTTCTTCTCTGGCTCCTTCTGCTCTATCTTCTGGCTCAAGAAGCGTGGTCTC 128372 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632 ||||| || || |||||| ||| ||| | || || |||||||||||| | || || || Sbjct 128373 ATGCCGGGGCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGAC 128432 Query 61633 TTTGC 61637 || || Sbjct 128433 TTCGC 128437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397438357547840