Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeis_20oleifera_20[genbank_20GCA_5F000441515.1_202013-07-26] 26,756 sequences; 1,402,725,009 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq53 91.5 2e-13 >seq53 Length=1747009 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 162607 GCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACA 162666 |||| || ||| || || ||||| ||||| ||| | ||| | || |||| |||||||| Sbjct 727088 GCCTGTAACGGCATCCTCTTCAACCACGAGAGCCCCCGCCGCGG-GAGAACTTCGTCACC 727030 Query 162667 CGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTT 162726 ||||||||| ||| ||| | ||| || | || || ||||| | | || || Sbjct 727029 CGCAAGATCACCCGCGCCGTCGGCCGGATCCGCGTCGGCCTCCAGACCAAGCTTTTCCTC 726970 Query 162727 GGAAACCTCAATGCC-CGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTG 162785 || || ||| ||| ||| | |||||||| |||| |||||||| ||||||||||| Sbjct 726969 GGCAATCTCTCGGCCGCGAGG-GACTGGGGGTTCGCCGGGGACTACGTCGAGGCTATGTG 726911 Query 162786 GTTGATGCTTCAGCAAGAGAAGCC 162809 | | ||||| ||||| || |||| Sbjct 726910 GCTCATGCTGCAGCAGGACGAGCC 726887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691227941470560