Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq14803 158 6e-37
seq309229 100 1e-19
seq491681 86.0 3e-15
seq180140 80.6 1e-13
seq123127 80.6 1e-13
seq43756 80.6 1e-13
seq341508 78.8 4e-13
seq456811 75.2 5e-12
seq342117 75.2 5e-12
seq302809 75.2 5e-12
seq301589 75.2 5e-12
seq162806 75.2 5e-12
seq158785 75.2 5e-12
seq32248 75.2 5e-12
seq451481 71.6 6e-11
seq424900 71.6 6e-11
seq421049 71.6 6e-11
seq395574 71.6 6e-11
seq186638 71.6 6e-11
seq164265 71.6 6e-11
seq162763 71.6 6e-11
seq133384 71.6 6e-11
>seq14803
Length=372
Score = 158 bits (174), Expect = 6e-37
Identities = 96/102 (94%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 313
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||| |||| | |||| |||| ||||||||||
Sbjct 312 CCGAATCCCCGCCGCGCGTCGCGGCGTGGGAAATGTGGCGTA 271
>seq309229
Length=7968
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct 4351 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACAGGGATGAGCCCAGCA 4410
Query 61 CCGAATCC 68
||||| ||
Sbjct 4411 CCGAAGCC 4418
>seq491681
Length=672
Score = 86.0 bits (94), Expect = 3e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57
||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct 220 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGAGGGAAGAGCCCA 276
>seq180140
Length=434
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 340 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 282
>seq123127
Length=11400
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 6775 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAATAGCCCAGC 6717
>seq43756
Length=1530
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 689 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACTGGGAATAGCCCAGC 747
>seq341508
Length=2514
Score = 78.8 bits (86), Expect = 4e-13
Identities = 60/70 (86%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGG-GAAGAGCCCAGC 59
||||||||||||||| |||||| ||| |||| ||||||| ||||||| || ||||||||
Sbjct 1829 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAATAGCCCAGC 1770
Query 60 GCCGAATCCC 69
| |||||||
Sbjct 1769 ACTGAATCCC 1760
>seq456811
Length=9609
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 1192 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 1134
>seq342117
Length=16184
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 8039 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 8097
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 8471 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 8529
>seq302809
Length=11613
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| ||||||||||||||||| ||||| | ||||||
Sbjct 7533 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAATACCCCAGC 7475
>seq301589
Length=7403
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 7167 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 7109
>seq162806
Length=11544
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 811 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 753
>seq158785
Length=18160
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||| | ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 4592 GGAAAAGAAACTATCAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 4650
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 11584 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACTGGGAATAGCCCAGC 11642
>seq32248
Length=925
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 734 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 676
>seq451481
Length=3563
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||| | || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 2828 GGAAAAGAAAGTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 2770
>seq424900
Length=15742
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||| ||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 5101 GGAAAATAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 5043
>seq421049
Length=8790
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| || || ||||||||
Sbjct 1731 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGAAATAGCCCAGC 1789
>seq395574
Length=8698
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 3667 GGAAAAGAAACGTACAAGGATTCCCCTAGTAACGGCGAGAGAACCGGGAATAGCCCAGC 3725
>seq186638
Length=10844
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| ||| ||||| ||||||||
Sbjct 4204 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCAAACCGGGAATAGCCCAGC 4146
>seq164265
Length=9373
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||| ||| |||| ||||| ||||||||
Sbjct 5313 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGTGAGCGAACCGGGAATAGCCCAGC 5255
>seq162763
Length=7684
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| ||||||| |||| |||| ||||| ||||||||
Sbjct 802 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGACGAGCGAACCGGGAATAGCCCAGC 744
>seq133384
Length=2081
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| |||| |||
Sbjct 457 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCTAGC 399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 229264645680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |