Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq14803 158 6e-37 seq309229 100 1e-19 seq491681 86.0 3e-15 seq180140 80.6 1e-13 seq123127 80.6 1e-13 seq43756 80.6 1e-13 seq341508 78.8 4e-13 seq456811 75.2 5e-12 seq342117 75.2 5e-12 seq302809 75.2 5e-12 seq301589 75.2 5e-12 seq162806 75.2 5e-12 seq158785 75.2 5e-12 seq32248 75.2 5e-12 seq451481 71.6 6e-11 seq424900 71.6 6e-11 seq421049 71.6 6e-11 seq395574 71.6 6e-11 seq186638 71.6 6e-11 seq164265 71.6 6e-11 seq162763 71.6 6e-11 seq133384 71.6 6e-11 >seq14803 Length=372 Score = 158 bits (174), Expect = 6e-37 Identities = 96/102 (94%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 313 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||| |||| | |||| |||| |||||||||| Sbjct 312 CCGAATCCCCGCCGCGCGTCGCGGCGTGGGAAATGTGGCGTA 271 >seq309229 Length=7968 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| Sbjct 4351 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACAGGGATGAGCCCAGCA 4410 Query 61 CCGAATCC 68 ||||| || Sbjct 4411 CCGAAGCC 4418 >seq491681 Length=672 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| Sbjct 220 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGAGGGAAGAGCCCA 276 >seq180140 Length=434 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 340 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 282 >seq123127 Length=11400 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 6775 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAATAGCCCAGC 6717 >seq43756 Length=1530 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 689 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACTGGGAATAGCCCAGC 747 >seq341508 Length=2514 Score = 78.8 bits (86), Expect = 4e-13 Identities = 60/70 (86%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGG-GAAGAGCCCAGC 59 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 1829 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAATAGCCCAGC 1770 Query 60 GCCGAATCCC 69 | ||||||| Sbjct 1769 ACTGAATCCC 1760 >seq456811 Length=9609 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 1192 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 1134 >seq342117 Length=16184 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 8039 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 8097 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 8471 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 8529 >seq302809 Length=11613 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||||||||||||| ||||| | |||||| Sbjct 7533 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAATACCCCAGC 7475 >seq301589 Length=7403 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 7167 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 7109 >seq162806 Length=11544 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 811 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 753 >seq158785 Length=18160 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||| | ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 4592 GGAAAAGAAACTATCAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 4650 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 11584 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACTGGGAATAGCCCAGC 11642 >seq32248 Length=925 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 734 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 676 >seq451481 Length=3563 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||| | || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 2828 GGAAAAGAAAGTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 2770 >seq424900 Length=15742 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||| ||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 5101 GGAAAATAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 5043 >seq421049 Length=8790 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| || || |||||||| Sbjct 1731 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGAAATAGCCCAGC 1789 >seq395574 Length=8698 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 3667 GGAAAAGAAACGTACAAGGATTCCCCTAGTAACGGCGAGAGAACCGGGAATAGCCCAGC 3725 >seq186638 Length=10844 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| ||| ||||| |||||||| Sbjct 4204 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCAAACCGGGAATAGCCCAGC 4146 >seq164265 Length=9373 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||| ||| |||| ||||| |||||||| Sbjct 5313 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGTGAGCGAACCGGGAATAGCCCAGC 5255 >seq162763 Length=7684 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||| |||| |||| ||||| |||||||| Sbjct 802 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGACGAGCGAACCGGGAATAGCCCAGC 744 >seq133384 Length=2081 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||| ||| Sbjct 457 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCTAGC 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229264645680