Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq384718 369 8e-100
seq479047 354 2e-95
seq86598 201 2e-49
seq162720 196 1e-47
seq120832 196 1e-47
seq266671 192 1e-46
seq323032 187 5e-45
seq473580 181 2e-43
seq361842 179 8e-43
seq353491 178 3e-42
seq113493 176 1e-41
seq265621 170 4e-40
seq40001 154 3e-35
seq50800 152 1e-34
seq102997 145 2e-32
seq183381 141 2e-31
seq53841 141 2e-31
seq177560 127 4e-27
seq134093 127 4e-27
seq495977 125 2e-26
seq15963 125 2e-26
seq472377 123 5e-26
seq218037 120 6e-25
seq488541 116 8e-24
seq283931 116 8e-24
seq191600 116 8e-24
seq142100 116 8e-24
seq101571 102 2e-19
seq321222 98.7 2e-18
seq453768 96.9 7e-18
seq170675 93.3 9e-17
seq255132 91.5 3e-16
seq316935 89.7 1e-15
seq83465 89.7 1e-15
seq519815 84.2 5e-14
>seq384718
Length=777
Score = 369 bits (408), Expect = 8e-100
Identities = 287/337 (85%), Gaps = 4/337 (1%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||||| |||||| ||||| | | ||||||||| || |||||||||||| |||| |||
Sbjct 101 CTTTACAACCCGAAGGCCTTCAT-CGCACACGCGGGAT-GGCTGGATCAGGGTTTCCCCC 158
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 159 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 218
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 219 TGTGGCTGGTCGTCCTCTCAAACCAGCTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 278
Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240
||||||||||||||||| | ||| || |||| |||||| | | | ||||||||||
Sbjct 279 CCAACTAGCTAATCCGATATCGGCCGCTCCAATAGTGCAAGGTCTTACGATCCCCTGCTT 338
Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTC-CGAACGTTATCCCCCACTACCA 299
|| |||||||| |||||||||||||||| | |||| || | |||||||||| ||||
Sbjct 339 TCCCCCGTAGGGCGTATGCGGTATTAGCTACGCTTTCGCGTA-GTTATCCCCCGCTACTG 397
Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336
|||| |||| | |||||||||||||| |||| |||
Sbjct 398 GGCACGTTCCGATACATTACTCACCCGTTCGCCACTC 434
>seq479047
Length=671
Score = 354 bits (392), Expect = 2e-95
Identities = 237/264 (90%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 104 CCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTT 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 CCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTT 612
Query 164 GGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGC 223
||| ||| ||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct 611 GGTAGGCCTTTACCCTACCAACTAGCTAATCCGACCTAGGCTCATCTAATAGCGTGAGGT 552
Query 224 CCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACG 283
|||||| ||||| ||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct 551 CCGAAGATCCCCCACTTTCTCCCGTAGGACGTATGCGGTATTAGCGTTCCTTTCGAAACG 492
Query 284 TTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTCTCAAGAG 343
|| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 491 TTGTCCCCCACTACTAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTGAATCGAG 432
Query 344 AAGCAAGCTTCTCTCTACCGCTCG 367
|||||||| ||||| |||||||
Sbjct 431 GAGCAAGCTCCTCTCATCCGCTCG 408
>seq86598
Length=14488
Score = 201 bits (222), Expect = 2e-49
Identities = 159/188 (85%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 11 CGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAAT 70
|| || ||||| || | || | ||||||| || ||||||||| ||||||||| ||
Sbjct 2238 CGTAGGCCTTCCATCTC-CATGTGGCATTG-CTCCGTCAGGCTTTTGCCCATTGTGGAAA 2181
Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130
|||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||
Sbjct 2180 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAATCCCAGTGTGGCTGAT 2121
Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCT 190
||||||||| |||||| ||| ||| |||||||||| ||| ||| |||||||||||||||
Sbjct 2120 CATCCTCTCGGACCAGCTACTAATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCT 2061
Query 191 AATCCGAC 198
|||| |||
Sbjct 2060 AATCAGAC 2053
>seq162720
Length=707
Score = 196 bits (216), Expect = 1e-47
Identities = 146/170 (86%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|| ||||||||| || |||||||||| |||||||| || ||||||||||||||||||
Sbjct 640 CATGCGGCATTG-CTCCGTCAGGCTTTCACCCATTGTGGAAAATTCCCCACTGCTGCCTC 582
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
||||||||||||| ||||||||| || | |||||| |||||||||||||| |||||| |
Sbjct 581 TCGTAGGAGTCTGGGCCGTGTCTCGGTCCTAGTGTGGCTGATCATCCTCTCGGACCAGCT 522
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| | |||||||| ||| ||| ||||||||||||||||||| |||
Sbjct 521 ACTGATCATTGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 472
>seq120832
Length=624
Score = 196 bits (216), Expect = 1e-47
Identities = 143/165 (87%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 34 GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTA 93
||||||| || |||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 248 GGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCATA 190
Query 94 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGA 153
||||||||| | |||||||||| |||||||| |||||||||||||| |||||| ||| ||
Sbjct 189 GGAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGA 130
Query 154 TCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| || ||||||| ||| ||| ||||||||||||||||||| |||
Sbjct 129 TCATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 85
>seq266671
Length=1116
Score = 192 bits (212), Expect = 1e-46
Identities = 143/166 (86%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||||||| || ||||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct 446 CACGCGGGAT-GGCTGGATCAGGCGCTAACCCATTGTCCAATATTCCTCACTGCTGCCTC 504
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| ||||| |||||||| || |
Sbjct 505 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCT 564
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194
| |||| ||| ||||||||||| ||||||||||||||| ||||||
Sbjct 565 AAAGATCATCGACTTGGTGAGCCGTTACCTCACCAACTATCTAATC 610
Score = 170 bits (188), Expect = 4e-40
Identities = 120/137 (88%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 58 CCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 117
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
Sbjct 636 CCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTAC 695
Query 118 CAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACC 177
||||||| ||||| |||||||| || || |||| ||| ||||||||||| |||||
Sbjct 696 CAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCATCGACTTGGTGAGCCGTTACC 755
Query 178 TCACCAACTAGCTAATC 194
|||||||||| ||||||
Sbjct 756 TCACCAACTATCTAATC 772
>seq323032
Length=3878
Score = 187 bits (206), Expect = 5e-45
Identities = 144/169 (85%), Gaps = 4/169 (2%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || ||||||||||||||||| || ||||||||||||||||||
Sbjct 3377 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTACGTAAAATTCCCCACTGCTGCCTC 3435
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| | |||||||||| |||||||| ||||||||||||| ||||||
Sbjct 3436 CCGTAGGAGTCTGGGCTGTGTCTCAGTCCCAGTGTGGTTGATCATCCTCTCGGACCAGCA 3495
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197
|| || |||||||||| ||| ||| ||||||||||||||||||| ||
Sbjct 3496 ACTGA---TCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGA 3541
>seq473580
Length=775
Score = 181 bits (200), Expect = 2e-43
Identities = 157/192 (82%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||||| |||||| || || | | | |||| ||| ||| ||| |||||||| ||||||
Sbjct 11 TTTACAACCCGAAGGCCGTCATCCCC-CACGTGGCGTTG-CTGCGTCAGGCTTCCGCCCA 68
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| ||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct 69 TTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGT 128
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| | | ||| |||||||| || | ||| ||||||||||||| ||||| ||| |||
Sbjct 129 GTGGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTACGCCATCACCGCAC 188
Query 182 CAACTAGCTAAT 193
|||| |||| ||
Sbjct 189 CAACAAGCTGAT 200
>seq361842
Length=689
Score = 179 bits (198), Expect = 8e-43
Identities = 158/193 (82%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 2 TTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
||||||| ||| || || |||| | |||||||||| |||||| |||| ||| || ||
Sbjct 363 TTTACAACCCGTAGGGCCGTCTTCCTG-CACGCGGCAT-GGCTGGTTCAGACTTGCGTCC 420
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
|||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 421 ATTGACCAATATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 480
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| | ||||||||||||| | || ||||| |||||||| ||| ||||| ||
Sbjct 481 TGTGGGGGGTCATCCTCTCAGATCCCCTAAACATCGTAGCCTTGGTATGCCGTTACCACA 540
Query 181 CCAACTAGCTAAT 193
|||||||||||||
Sbjct 541 CCAACTAGCTAAT 553
>seq353491
Length=550
Score = 178 bits (196), Expect = 3e-42
Identities = 139/165 (84%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||| |||||| |||||||| ||||||||| |||||||||| |||||||||||
Sbjct 262 CACGCGGCAT-GGCTGGTTCAGGCTTGCGCCCATTGACCAATATTCCTTACTGCTGCCTC 204
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| ||| |||||||||| | |
Sbjct 203 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCT 144
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
| ||||| |||||||| ||| ||||| ||||||||||||||
Sbjct 143 AGACATCGTTGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAAT 99
>seq113493
Length=12835
Score = 176 bits (194), Expect = 1e-41
Identities = 158/196 (81%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 23 TTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGC 82
||||| |||||| |||| |||||||||||||| |||||||||||| |||||| |||||
Sbjct 6313 TTCACTCACGCGATATTG-CTGGATCAGGCTTTTTCCCATTGTCCAAGATTCCC-ACTGC 6370
Query 83 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142
|||| ||||| ||||||| | |||||| | ||| |||||||| |||||||||| |||
Sbjct 6371 TGCCCCCCGTGGGAGTCTAGGCCGTGTTTTAGTCCCAGTGTGGCTGATCATCCGAAAAGA 6430
Query 143 CCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAG 202
|||| || | ||| | | |||||| ||| |||||| |||||||| ||||| | || ||
Sbjct 6431 CCAGCTAAGCATCATTGGCTTGGTCAGCTTTTACCTGACCAACTACCTAATACTACACAG 6490
Query 203 GCTCATCTGATAGCGC 218
||||||| | |||||
Sbjct 6491 GCTCATCAAACAGCGC 6506
>seq265621
Length=2901
Score = 170 bits (188), Expect = 4e-40
Identities = 156/193 (81%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 2 TTTACAATCC-GAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
||||||| || || | || |||| | |||||||||| |||||| |||| || | ||
Sbjct 1922 TTTACAACCCAGAGGGCCGTCTTCCTG-CACGCGGCAT-GGCTGGTTCAGAGTTCCCTCC 1979
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
|||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1980 ATTGACCAATATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 2039
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| | |||||||||||| | || ||||||||||||||| ||| ||||| |
Sbjct 2040 TGTGGGGGGCCATCCTCTCAGATCCCCTAGTCATCGTCGCCTTGGTGGGCCGTTACCCCG 2099
Query 181 CCAACTAGCTAAT 193
|||||||||||||
Sbjct 2100 CCAACTAGCTAAT 2112
>seq40001
Length=498
Score = 154 bits (170), Expect = 3e-35
Identities = 110/124 (89%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||| ||||||| |||||| | ||| |||||||||||| || |||||||||||||||
Sbjct 373 CTTTACGATCCGAAAACCTTCAT-CACTCACGCGGCATTG-CTCCATCAGGCTTTCGCCC 430
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 431 ATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 490
Query 121 TGTG 124
||||
Sbjct 491 TGTG 494
>seq50800
Length=353
Score = 152 bits (168), Expect = 1e-34
Identities = 120/144 (83%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 66 CCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGA 125
||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct 353 CCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAGTGTGG 294
Query 126 CTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAAC 185
| |||||||||| | ||| |||| ||||||||||||||| ||||| |||||||
Sbjct 293 GGGCCGCTCCTCTCAGAGCCCCTACTGATCATCGCCTTGGTGAGCCGTTACCCCACCAAC 234
Query 186 TAGCTAATCCGACCTAGGCTCATC 209
||||||||| ||| | || ||||
Sbjct 233 TAGCTAATCAGACGCAAGCCCATC 210
>seq102997
Length=950
Score = 145 bits (160), Expect = 2e-32
Identities = 135/170 (79%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||| |||||| |||| || | |||||| ||||||||||| |||||||||||
Sbjct 748 CACGCGGCAT-GGCTGGGTCAGAGTTGCCTCCATTGCCCAATATTCCCTACTGCTGCCTC 806
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||| || |||| ||||||| || |||| | ||||||||||| | |
Sbjct 807 CCGTAGGAGTTGGGTCCGTATCTCAGTACCCATGTGGGGGCCAATCCTCTCAGAACCCCT 866
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| ||| ||||| |||||||||||||| |||
Sbjct 867 ACTGATCATCGCCTTGGTAGGCCGTTACCCTGCCAACTAGCTAATCAGAC 916
>seq183381
Length=792
Score = 141 bits (156), Expect = 2e-31
Identities = 99/113 (88%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 97 GTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCG 156
|||||| |||||||||||| |||||||| ||||||||||||||||||||| || ||||||
Sbjct 1 GTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCG 60
Query 157 TCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209
||| |||||| ||||||||| ||||||||| ||||||| || ||||||||
Sbjct 61 TCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCCTACGCGGGCTCATC 113
>seq53841
Length=24852
Score = 141 bits (156), Expect = 2e-31
Identities = 104/121 (86%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 78 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTC 137
|| |||| | || ||||||||| | | |||||||||| |||||||| ||||||||||||
Sbjct 6483 ACCGCTGACATCCATAGGAGTCTAGGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTC 6542
Query 138 TCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197
||||||||| ||| |||| |||||||||| ||| ||| ||||||||||||||||||| ||
Sbjct 6543 TCAGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGA 6602
Query 198 C 198
|
Sbjct 6603 C 6603
>seq177560
Length=431
Score = 127 bits (140), Expect = 4e-27
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 180 ACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCT 239
||||||||||||||| || | ||| || | ||| |||||||||||||||||| ||
Sbjct 1 ACCAACTAGCTAATCAGATATCGGCCGCTCCAAAAGCATAAGGCCCGAAGGTCCCCTACT 60
Query 240 TTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA 299
||| |||| | |||||||||||||||||| |||| ||||||||||||||| |
Sbjct 61 TTCATCCGTGGATCGTATGCGGTATTAGCGTAACTTTCGCTACGTTATCCCCCACTTCTG 120
Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCT 352
|| | |||| | ||||||||||||| |||| ||| || | ||||||||
Sbjct 121 GGTACGTTCCGATATATTACTCACCCGTTCGCCACTCGTCAGCGGAGCAAGCT 173
>seq134093
Length=252
Score = 127 bits (140), Expect = 4e-27
Identities = 177/240 (74%), Gaps = 15/240 (6%)
Strand=Plus/Minus
Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189
||| |||||||| | | |||| ||||||||||||||||||| ||||| |||||||||||
Sbjct 252 TCACCCTCTCAGGTCGGCTACGCATCGTCGCCTTGGTGAGCCGTTACCCCACCAACTAGC 193
Query 190 TAATCCGACCTAGGCTCATCTGATAGCGCAAG---GC-CCGAAGGTCCC-CTGCTTTC-T 243
|||| || | |||| |||| || | || || ||| || ||||| | |
Sbjct 192 TAATGCGCCGCAGGCCCATCCTTCAGTGACAGATTGCTCCGTCTTTCGTTCTGCTCCCAT 133
Query 244 CCCG---TAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300
| | ||| | |||| |||||||||| ||||||||| |||||||| ||| |
Sbjct 132 GCAGGAATAGAAAGTATCCGGTATTAGCTACCGTTTCCGGTAGTTATCCCAGGCTAAAGG 73
Query 301 GCAGATT-CCTAGGCATTACTCACCCGTCCGCCGC----TCTCAAGAGAAGCAAGCTTCT 355
|||| || |||| | ||||||||||||||||||| |||||| ||||||||||||||
Sbjct 72 GCAGGTTGCCTACGTGTTACTCACCCGTCCGCCGCTAAGTCTCAA-AGAAGCAAGCTTCT 14
>seq495977
Length=63258
Score = 125 bits (138), Expect = 2e-26
Identities = 84/94 (89%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164
||||||||||| |||||||| |||||||||||||| |||||| ||| |||| ||||||||
Sbjct 47772 CGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTG 47713
Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| ||| ||| ||||||||||||||||||| |||
Sbjct 47712 GTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 47679
>seq15963
Length=292
Score = 125 bits (138), Expect = 2e-26
Identities = 144/196 (73%), Gaps = 12/196 (6%)
Strand=Plus/Plus
Query 140 AGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACC 199
||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||||| |||
Sbjct 1 AGACCAGCTACCGATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCGGACG 60
Query 200 TAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGC 259
||||| || | ||||| | ||||||| || || | |||||
Sbjct 61 CAGGCTACTCCAAAGGCGCA------------TCGCTGCTTTGAGCCTCAGCTCATATGC 108
Query 260 GGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTAC 319
||||||||| || |||||| || ||| |||||||| | | || ||||||| || |||
Sbjct 109 GGTATTAGCCTCAGTTTCCCAAGGTTGTCCCCCACCTCTGGACACATTCCTACGCGGTAC 168
Query 320 TCACCCGTCCGCCGCT 335
||||||||||||| ||
Sbjct 169 TCACCCGTCCGCCACT 184
>seq472377
Length=231
Score = 123 bits (136), Expect = 5e-26
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||| |||||| |||||||| ||||||||| |||||||||| |||||||||||
Sbjct 89 CACGCGGCAT-GGCTGGTTCAGGCTTCCGCCCATTGACCAATATTCCTTACTGCTGCCTC 31
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118
|||||||||||||| |||||||||||| ||
Sbjct 30 CCGTAGGAGTCTGGTCCGTGTCTCAGTACC 1
>seq218037
Length=249
Score = 120 bits (132), Expect = 6e-25
Identities = 176/247 (71%), Gaps = 19/247 (8%)
Strand=Plus/Minus
Query 104 CCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTT 163
|||||||||||| |||||||| | ||||| |||||||| | | |||| |||||||||||
Sbjct 248 CCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTCGCCTT 189
Query 164 GGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGC 223
|| ||||| ||||||| ||||||||||||| || | ||| ||||| || | | | ||
Sbjct 188 GGGGAGCCGTTACCTCTCCAACTAGCTAATGCGCCGCGGGCCCATCTCATCGTG-AGAGC 130
Query 224 CCGAAGGTCCCCTGCTTTCTCCCG----TAGGACG----------TATGCGGTATTAGCG 269
|||| |||| ||| ||| |||| | ||| ||||||||||
Sbjct 129 AAGAAG---CCCTCTTTTAATCCGGCACCAGGAGGTGCTAGATGTTATCCGGTATTAGCC 73
Query 270 TCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTC 328
| |||||| |||||||| | | ||| || || || | | |||||||||||||
Sbjct 72 CCGGTTTCCCGGAGTTATCCCAGTCGATAAGGTAGGTTGCCCACGTGTTACTCACCCGTC 13
Query 329 CGCCGCT 335
|||||||
Sbjct 12 CGCCGCT 6
>seq488541
Length=418
Score = 116 bits (128), Expect = 8e-24
Identities = 84/96 (88%), Gaps = 1/96 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||| |||||| |||| || | |||||| |||||||||| |||||||||||
Sbjct 127 CACGCGGCAT-GGCTGGTTCAGAGTTGCCTCCATTGACCAATATTCCTTACTGCTGCCTC 185
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTG 124
|||||||||||||| |||||||||||| ||||||||
Sbjct 186 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTG 221
>seq283931
Length=338
Score = 116 bits (128), Expect = 8e-24
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 87 TCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146
|||||||||||||||| |||||||||||| |||||||| | ||||||||||||| |
Sbjct 338 TCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGGTCATCCTCTCAGATCCC 279
Query 147 TTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
|| ||||||||||||||| ||| ||||| | |||||||||||||
Sbjct 278 CTAGTCATCGTCGCCTTGGTGGGCCGTTACCCCGCCAACTAGCTAAT 232
>seq191600
Length=457
Score = 116 bits (128), Expect = 8e-24
Identities = 76/81 (94%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||| | |||||| ||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 379 CTTTACGACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 436
Query 61 ATTGTCCAATATTCCCCACTG 81
|||||||||||||||||||||
Sbjct 437 ATTGTCCAATATTCCCCACTG 457
>seq142100
Length=237
Score = 116 bits (128), Expect = 8e-24
Identities = 99/118 (84%), Gaps = 3/118 (3%)
Strand=Plus/Plus
Query 2 TTTACAATCC-GAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
||||||| || || | ||||||| | |||||||||| |||||| |||| |||| ||
Sbjct 122 TTTACAACCCAGAGGGCCTTCTTCCTG-CACGCGGCAT-GGCTGGGTCAGAGTTTCCTCC 179
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118
|||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||
Sbjct 180 ATTGCCCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCC 237
>seq101571
Length=235
Score = 102 bits (112), Expect = 2e-19
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 95 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 154
|||||||| |||||||||||| |||||||| |||| |||||||| | ||| ||
Sbjct 235 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 176
Query 155 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCT 210
| | ||||||||| ||| ||||| ||||||||||||||| ||| | ||||||||
Sbjct 175 CATAGCCTTGGTGTGCCGTTACCACACCAACTAGCTAATGGGACGCATGCTCATCT 120
>seq321222
Length=580
Score = 98.7 bits (108), Expect = 2e-18
Identities = 75/89 (84%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164
||||||||||| |||||||| ||| |||||||||| | || ||||||||||||
Sbjct 1 CGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAGACATCGTCGCCTTG 60
Query 165 GTGAGCCATTACCTCACCAACTAGCTAAT 193
||||||| |||||||||||||||||||||
Sbjct 61 GTGAGCCGTTACCTCACCAACTAGCTAAT 89
>seq453768
Length=293
Score = 96.9 bits (106), Expect = 7e-18
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 95 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 154
|||||||| |||||||||||| |||||||| |||| |||||||| | ||| ||
Sbjct 293 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 234
Query 155 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCT 210
| |||||||||| ||| ||||| |||||||||||||| ||| | ||||||||
Sbjct 233 CATCGCCTTGGTATGCCGTTACCATACCAACTAGCTAATGGGACGCATGCTCATCT 178
>seq170675
Length=505
Score = 93.3 bits (102), Expect = 9e-17
Identities = 113/149 (76%), Gaps = 4/149 (3%)
Strand=Plus/Minus
Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105
|||| || || || |||||| || |||||| ||||| |||||||| ||||||| |||||
Sbjct 393 ATCAAGCGTTAGCACATTGTTCAC-ATTCCCTACTGCAGCCTCCCGAAGGAGTCCGGACC 335
Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165
| | || ||||| | | ||| |||||||||| | ||| || ||||| | ||||
Sbjct 334 TTATTGCATTTCCAC-GCGGCTGTACATCCTCTCA-AGCAGCTAAAGATCGCAGGCTTG- 278
Query 166 TGAGCCATTACCTCACCAACTAGCTAATC 194
| ||| ||||||||||||| | ||||||
Sbjct 277 TAAGCTTTTACCTCACCAACAACCTAATC 249
>seq255132
Length=236
Score = 91.5 bits (100), Expect = 3e-16
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 109 TCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGA 168
||||||| |||||||| | | ||| |||||||| || | ||| |||||||||||||||
Sbjct 236 TCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTGA 177
Query 169 GCCATTACCTCACCAACTAGCTAAT 193
||| ||||||||||||| |||| ||
Sbjct 176 GCCGTTACCTCACCAACAAGCTGAT 152
>seq316935
Length=216
Score = 89.7 bits (98), Expect = 1e-15
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164
||||||||||| |||||||| ||| |||||||||| | || ||||||||||||
Sbjct 216 CGTGTCTCAGTACCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAGACATCGTCGCCTTG 157
Query 165 GTGAGCCATTACCTCACCAACTAGCTAAT 193
||| ||| ||||| |||||||||||||||
Sbjct 156 GTGGGCCGTTACCCCACCAACTAGCTAAT 128
>seq83465
Length=469
Score = 89.7 bits (98), Expect = 1e-15
Identities = 72/86 (84%), Gaps = 1/86 (1%)
Strand=Plus/Minus
Query 251 GACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATT-CC 309
|| |||| |||||||||| |||||||||| | |||||||| |||| |||||| || ||
Sbjct 397 GATGTATCCGGTATTAGCATCCGTTTCCGGAAGTTATCCCAGACTATAAGGCAGGTTGCC 338
Query 310 TAGGCATTACTCACCCGTCCGCCGCT 335
|| | ||||||||||||||||||||
Sbjct 337 TACGTGTTACTCACCCGTCCGCCGCT 312
>seq519815
Length=146219
Score = 84.2 bits (92), Expect = 5e-14
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130
|||||||||||| ||| ||| | ||||| || ||||||| ||| ||||||||||||||
Sbjct 27629 ATTCCCCACTGCCGCCCCCCATGGGAGTTCGGGTCGTGTCTTAGTCCCAGTGTGACTGAT 27570
Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171
|||| ||||||| || | ||| | | |||||| ||||
Sbjct 27569 CATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCC 27529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1066365278560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |