Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455 .1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters Query= AAMG01001445.1 Length=285 Score E Sequences producing significant alignments: (Bits) Value seq175545 105 1e-20 seq68151 96.9 6e-18 >seq175545 Length=4821 Score = 105 bits (116), Expect = 1e-20 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 27 GCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCGAGGAGCAGATCCTGCTCGGCATCA 86 |||| ||||| |||||||||||||||||||| ||| | |||||||||||||| ||| ||| Sbjct 2285 GCCCCCGTGACCGGCTGGTGCTGGTGCAGGTAGGCAACGAGCAGATCCTGCTGGGCCTCA 2226 Query 87 CCCCCGGCCGCATCACCCCGCTGCATGT 114 | || || ||||||| ||||||||| || Sbjct 2225 CGCCTGGGCGCATCAACCCGCTGCACGT 2198 >seq68151 Length=297 Score = 96.9 bits (106), Expect = 6e-18 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 27 GCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCGAGGAGCAGATCCTGCTCGGCATCA 86 ||||||| || ||||||||||||||||||| ||| | |||||| ||||||||||| ||| Sbjct 198 GCCCGCGCGACAGGCTGGTGCTGGTGCAGGTCGGCAACGAGCAGGTCCTGCTCGGCCTCA 257 Query 87 CCCCCGGCCGCATCACCCCGCTGCATGT 114 | ||||| ||||||| | | ||||| || Sbjct 258 CGCCCGGGCGCATCAACTCACTGCACGT 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 808661213002