Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eleusine_20coracana_20subsp._20coracana_20[genbank_20GCA_5F002180455
.1_202017-06-08] 525,627 sequences; 1,195,986,209 total letters
Query= AAMG01001464.1
Length=239
Score E
Sequences producing significant alignments: (Bits) Value
seq253394 141 1e-31
seq112664 138 1e-30
>seq253394
Length=839
Score = 141 bits (156), Expect = 1e-31
Identities = 143/186 (77%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 21 CTTGAGTTGCAGCACGTTGTTGGCCAGGTTGCCGACATCACCGATGTTGCGGAAGAAGTT 80
|||| |||||||| | |||||||||||||| || ||||| | |||| |||||||||
Sbjct 785 CTTGCCTTGCAGCAGATCGTTGGCCAGGTTGCGCACGTCACCCAGGTTGTTGAAGAAGTT 726
Query 81 GTGAACGCCGTCCTGCACAAATTGTGGGGTGACGAACTGATAGCCCTGGGCGATTGGCTT 140
| |||||| |||||| || || |||| ||||||||| ||||||| |||||
Sbjct 725 GCTCACGCCGGTCTGCACGAAGCCGGGCGTGAAACGCTGATAGCCTTGGGCGACCGGCTT 666
Query 141 GAGGGCATAGGTGTCAACGGTGTCGTTGAAGGTGAAGATGGGGCGGTTGACGCTTTCCCA 200
||||||||||||||| | ||| |||||||| |||||| |||||||| || ||||||
Sbjct 665 GAGGGCATAGGTGTCCAGGGTATCGTTGAACACGAAGATCTTGCGGTTGAAGCCTTCCCA 606
Query 201 CGGGTC 206
|| ||
Sbjct 605 GGGATC 600
>seq112664
Length=4250
Score = 138 bits (152), Expect = 1e-30
Identities = 166/225 (74%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 1 TCGACGCCTGCATTGAGCGGCTTGAGTTGCAGCACGTTGTTGGCCAGGTTGCCGACATCA 60
|| ||||| || | | ||| |||| || || | |||||||||||||||||||||||
Sbjct 3268 TCCACGCCGGCGTCGTGCGCCTTGCCCTGGAGGAGATTGTTGGCCAGGTTGCCGACATCG 3327
Query 61 CCGATGTTGCGGAAGAAGTTGTGAACGCCGTCCTGCACAAATTGTGGGGTGACGAACTGA 120
|||| ||||||||| | ||||| || ||| | || || || || || || | |
Sbjct 3328 CCGACGTTGCGGAATACATTGTGCACACCGGTTTCCAGGAACTGCGGTGTCACCGCCCGG 3387
Query 121 TAGCCCTGGGCGATTGGCTTGAGGGCATAGGTGTCAACGGTGTCGTTGAAGGTGAAGATG 180
|| |||||||| | |||||||||||| ||||| || ||||| ||||||||| |||| |
Sbjct 3388 TACCCCTGGGCCAGTGGCTTGAGGGCGTAGGTATCGACGGTATCGTTGAAGCGAAAGACG 3447
Query 181 GGGCGGTTGACGCTTTCCCACGGGTCATCTTCCGAGGCCGCTTGG 225
|| ||||||| ||||| ||| ||||||| ||||| |||
Sbjct 3448 GGACGGTTGAACGACTCCCAGGGG---TCTTCCGTTGCCGCCTGG 3489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 662210757104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |